RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 SELENOFO60613 162 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 FZD7O75084 574 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 ONECUT2O95948 504 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 GASTP01350 101 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 HLA-DOBP13765 273 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 EIF2DP41214 584 aaKnown RBP9.79□□□□□ -0.84
CLN8-201ENST00000331222 SEMA3BQ13214 749 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 MSMO1Q15800 293 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 CORO6Q6QEF8 472 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 PRSS48Q7RTY5 328 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 OR13C9Q8NGT0 318 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 OR52N5Q8NH56 324 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 CPNE4Q96A23 557 aaPredicted RBP9.79□□□□□ -0.84
CLN8-201ENST00000331222 UBL7Q96S82 380 aaPredicted RBP9.79□□□□□ -0.84
CLN8-201ENST00000331222 C1QTNF2Q9BXJ5 285 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 AMBRA1Q9C0C7 1298 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 P2RY12Q9H244 342 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 COL1A1P02452 1464 aaPredicted RBP9.79□□□□□ -0.84
CLN8-201ENST00000331222 TRIP12Q14669 1992 aaPredicted RBP9.79□□□□□ -0.84
CLN8-201ENST00000331222 NCBP2LA6PVI3 153 aaKnown RBP9.79□□□□□ -0.84
CLN8-201ENST00000331222 CT45A6P0DMU7 189 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 CT45A5P0DMU8 189 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 CT45A7P0DMV0 189 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 CT45A8P0DMV1 189 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 CT45A9P0DMV2 189 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 ELAVL4P26378 380 aaKnown RBP9.79□□□□□ -0.84
CLN8-201ENST00000331222 GRB2P62993 217 aaKnown RBP9.79□□□□□ -0.84
CLN8-201ENST00000331222 UBE2IP63279 158 aaKnown RBP9.79□□□□□ -0.84
CLN8-201ENST00000331222 CT45A2Q5DJT8 189 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 CT45A1Q5HYN5 189 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 OPN5Q6U736 354 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 NLRC3Q7RTR2 1065 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 SYT9Q86SS6 491 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 CT45A3Q8NHU0 189 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 NMNAT3Q96T66 252 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 DHRS9Q9BPW9 319 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 SARGQ9BW04 601 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 SLC39A9Q9NUM3 307 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 SLAMF8Q9P0V8 285 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 ONECUT1Q9UBC0 465 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 HHLA2Q9UM44 414 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 CSF1P09603 554 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 TMEM244Q5VVB8 128 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 THNSL2Q86YJ6 484 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 SLC35G3Q8N808 338 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 OR5K2Q8NHB8 316 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 ZNRF4Q8WWF5 429 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 TNFRSF13CQ96RJ3 184 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 BCL7BQ9BQE9 202 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 PITHD1Q9GZP4 211 aaPredicted RBP9.79□□□□□ -0.84
CLN8-201ENST00000331222 OR51J1Q9H342 316 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 KIAA1456Q9P272 454 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 ENTPD2Q9Y5L3 495 aa9.79□□□□□ -0.84
CLN8-201ENST00000331222 GABRPO00591 440 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 PDZD11Q5EBL8 140 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 PARM1Q6UWI2 310 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 C6orf89Q6UWU4 347 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 BAGE3Q86Y29 109 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 BAGE2Q86Y30 109 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 C3orf30Q96M34 536 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 PBX4Q9BYU1 374 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 GSTO2Q9H4Y5 243 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 BTNL2Q9UIR0 455 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 NUBP2Q9Y5Y2 271 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 MEGF11A6BM72 1044 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 KRBOX1C9JBD0 128 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 RGRP47804 291 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 MS4A2Q01362 244 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 CAMK2BQ13554 666 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 SPATS1Q496A3 300 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 TMEM135Q86UB9 458 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 ZNF454Q8N9F8 522 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 FYTTD1Q96QD9 318 aaKnown RBP9.78□□□□□ -0.84
CLN8-201ENST00000331222 PRRT1Q99946 306 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 EDEM2Q9BV94 578 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 HEYLQ9NQ87 328 aaPredicted RBP9.78□□□□□ -0.84
CLN8-201ENST00000331222 RCE1Q9Y256 329 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 V9GYS6 101 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 PHRF1Q9P1Y6 1649 aaKnown RBP9.78□□□□□ -0.84
CLN8-201ENST00000331222 BRWD1Q9NSI6 2320 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 G3V2L1 256 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 TMX2-CTNND1H3BSU7 103 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 K7ESM1 405 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 CYB561P49447 251 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 MPEG1Q2M385 716 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 MORN1Q5T089 497 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 NCCRP1Q6ZVX7 275 aaPredicted RBP9.78□□□□□ -0.84
CLN8-201ENST00000331222 OR51H1Q8NH63 302 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 ZNF420Q8TAQ5 688 aaPredicted RBP9.78□□□□□ -0.84
CLN8-201ENST00000331222 PLPPR2Q96GM1 343 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 GPR173Q9NS66 373 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 MRPS28Q9Y2Q9 187 aaKnown RBP9.78□□□□□ -0.84
CLN8-201ENST00000331222 ZC3H12DA2A288 527 aaKnown RBP9.78□□□□□ -0.84
CLN8-201ENST00000331222 PEA15Q15121 130 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 NLRP8Q86W28 1048 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 DNAJC22Q8N4W6 341 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 TMEM255BQ8WV15 326 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 PATE1Q8WXA2 126 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 ASB11Q8WXH4 323 aa9.78□□□□□ -0.84
CLN8-201ENST00000331222 LMF2Q9BU23 707 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms