RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 FAM208BQ5VWN6 2430 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 FAM240BA0A1B0GVZ2 78 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 DAPL1A0PJW8 107 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 HMX3A6NHT5 357 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 TMEM229AB2RXF0 380 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 IL33O95760 270 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 FGF5P12034 268 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 ATF4P18848 351 aaPredicted RBP14.43□□□□□ -0.1
PDGFB-201ENST00000331163 EEF1A1P68104 462 aaKnown RBP14.43□□□□□ -0.1
PDGFB-201ENST00000331163 SLC3A1Q07837 685 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 FOXF1Q12946 379 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 CCDC190Q86UF4 302 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 POGLUT1Q8NBL1 392 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 ANKK1Q8NFD2 765 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 OR1J4Q8NGS1 313 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 TMED9Q9BVK6 235 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 HDHD5Q9BXW7 423 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 UBQLN3Q9H347 655 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 TESQ9UGI8 421 aaKnown RBP14.43□□□□□ -0.1
PDGFB-201ENST00000331163 HSPE1-MOB4S4R3N1 261 aa14.43□□□□□ -0.1
PDGFB-201ENST00000331163 A0A1W2PQL4 384 aaPredicted RBP14.42□□□□□ -0.1
PDGFB-201ENST00000331163 I3L521 148 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 NTN3O00634 580 aaPredicted RBP14.42□□□□□ -0.1
PDGFB-201ENST00000331163 PPM1BO75688 479 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 ZNF3P17036 446 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 PSMA1P25786 263 aaKnown RBP14.42□□□□□ -0.1
PDGFB-201ENST00000331163 ZNF136P52737 540 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 ZFP36L1Q07352 338 aaKnown RBP14.42□□□□□ -0.1
PDGFB-201ENST00000331163 RNASE12Q5GAN4 147 aaKnown RBP14.42□□□□□ -0.1
PDGFB-201ENST00000331163 ACER2Q5QJU3 275 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 YOD1Q5VVQ6 348 aaPredicted RBP14.42□□□□□ -0.1
PDGFB-201ENST00000331163 ARL9Q6T311 187 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 MBOAT2Q6ZWT7 520 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 OR6N2Q8NGY6 317 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 HRASLS5Q96KN8 279 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 A0A0G2JMP0 313 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 SULT2B1O00204 365 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 SYT5O00445 386 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 TSPAN4O14817 238 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 CELP19835 753 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 ACVR1BP36896 505 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 DDOSTP39656 456 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 RORCP51449 518 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 FAM198BQ6UWH4 519 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 OR8K3Q8NH51 312 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 DNAJA4Q8WW22 397 aaPredicted RBP14.42□□□□□ -0.1
PDGFB-201ENST00000331163 SPACA9Q96E40 222 aaPredicted RBP14.42□□□□□ -0.1
PDGFB-201ENST00000331163 ZNF71Q9NQZ8 489 aaPredicted RBP14.42□□□□□ -0.1
PDGFB-201ENST00000331163 YARS2Q9Y2Z4 477 aaKnown RBP14.42□□□□□ -0.1
PDGFB-201ENST00000331163 NPIPA5E9PKD4 350 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 UMODP07911 640 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 SOX18P35713 384 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 DCAF7P61962 342 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 C17orf67Q0P5P2 114 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 CAMK2DQ13557 499 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 C3AR1Q16581 482 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 OR8D4Q8NGM9 314 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 OR6N1Q8NGY5 312 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 POP5Q969H6 163 aaKnown RBP14.42□□□□□ -0.1
PDGFB-201ENST00000331163 MED30Q96HR3 178 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 NPIPA1Q9UND3 350 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 RABL2BQ9UNT1 228 aa14.42□□□□□ -0.1
PDGFB-201ENST00000331163 SLC6A6P31641 620 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 TATDN3Q17R31 274 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 WIPI1Q5MNZ9 446 aaPredicted RBP14.41□□□□□ -0.1
PDGFB-201ENST00000331163 SLC35D2Q76EJ3 337 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 LUZP2Q86TE4 346 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 CDH24Q86UP0 819 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 NAXEQ8NCW5 288 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 PLPP5Q8NEB5 264 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 OR8J1Q8NGP2 316 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 ZNF417Q8TAU3 575 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 LRRC20Q8TCA0 184 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 ZNF587Q96SQ5 575 aaPredicted RBP14.41□□□□□ -0.1
PDGFB-201ENST00000331163 BARHL1Q9BZE3 327 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 SYT4Q9H2B2 425 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 SLA2Q9H6Q3 261 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 MAN2C1Q9NTJ4 1040 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 ZNF226Q9NYT6 803 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 CCDC59Q9P031 241 aaKnown RBP14.41□□□□□ -0.1
PDGFB-201ENST00000331163 CLDN16Q9Y5I7 305 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 A0A1B0GVC2 190 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 BLACEA4D250 179 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 A6NIN4 97 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 DRD5P21918 477 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 APEX1P27695 318 aaKnown RBP14.41□□□□□ -0.1
PDGFB-201ENST00000331163 TSPAN31Q12999 210 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 IL10RAQ13651 578 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 DMRTC1Q5HYR2 192 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 C3P1Q6ZMU1 363 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 FBLIM1Q8WUP2 373 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 NXPE2Q96DL1 559 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 UTP23Q9BRU9 249 aaKnown RBP14.41□□□□□ -0.1
PDGFB-201ENST00000331163 MEPEQ9NQ76 525 aaPredicted RBP14.41□□□□□ -0.1
PDGFB-201ENST00000331163 EPG5Q9HCE0 2579 aa14.41□□□□□ -0.1
PDGFB-201ENST00000331163 THBS1P07996 1170 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 HK1P19367 917 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 EFR3AQ14156 821 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 HEPHL1Q6MZM0 1159 aa14.4□□□□□ -0.1
PDGFB-201ENST00000331163 FAM109AQ8N4B1 249 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms