RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ESX1Q8N693 406 aa18.32■□□□□ 0.52
RIPPLY3-201ENST00000329553 GDPD1Q8N9F7 314 aa18.32■□□□□ 0.52
RIPPLY3-201ENST00000329553 DEFB124Q8NES8 71 aa18.32■□□□□ 0.52
RIPPLY3-201ENST00000329553 STK35Q8TDR2 534 aa18.32■□□□□ 0.52
RIPPLY3-201ENST00000329553 TP53I11O14683 189 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 LRRTM2O43300 516 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 LRP3O75074 770 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 CRTC2Q53ET0 693 aaPredicted RBP18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 ATAD3CQ5T2N8 411 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 FAM69AQ5T7M9 428 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 DDI2Q5TDH0 399 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 PRAMEF20Q5VT98 475 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 ZPLD1Q8TCW7 415 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 KIAA1143Q96AT1 154 aaPredicted RBP18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 TM9SF2Q99805 663 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 JAM3Q9BX67 310 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 TAS2R5Q9NYW4 299 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 EP300Q09472 2414 aaPredicted RBP18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 TEX13CA0A0J9YWL9 993 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 OR6C68A6NDL8 312 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 FABP12A6NFH5 140 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 TNFSF15O95150 251 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 CSF3P09919 207 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 CDKN2AP42771 156 aaKnown RBP18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 SSR4P51571 173 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 DLX5P56178 289 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 MLF1P58340 268 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 FABP5Q01469 135 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 FOXF1Q12946 379 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 MAMDC2Q7Z304 686 aaPredicted RBP18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 TMEM99Q8N816 258 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 DIRAS2Q96HU8 199 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 RERGLQ9H628 205 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 FAM86C1Q9NVL1 165 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 FBXL2Q9UKC9 423 aa18.31■□□□□ 0.52
RIPPLY3-201ENST00000329553 C12orf71A8MTZ7 269 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 SHISA8B8ZZ34 492 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 RGS13O14921 159 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 SERPINI2O75830 405 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 MT-ATP6P00846 226 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 MRPL3P09001 348 aaKnown RBP18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 APEHP13798 732 aaKnown RBP18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 APOBEC1P41238 236 aaKnown RBP18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 ACBD7Q8N6N7 88 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 WDSUB1Q8N9V3 476 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 SYT14Q8NB59 555 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 NLGN4YQ8NFZ3 816 aaPredicted RBP18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 OR51L1Q8NGJ5 315 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 ZNRF4Q8WWF5 429 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 CAPSLQ8WWF8 208 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 TBX5Q99593 518 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 ADGRL4Q9HBW9 690 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 ASB6Q9NWX5 421 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 HAO2Q9NYQ3 351 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 GSTK1Q9Y2Q3 226 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 SLC6A5Q9Y345 797 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 N6AMT1Q9Y5N5 214 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 AHCTF1Q8WYP5 2266 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 PCSK5Q92824 1860 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 TRDV1A0A1B0GX56 115 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 ETV2O00321 342 aaPredicted RBP18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 HPP00738 406 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 SBK2P0C263 348 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 ICAM2P13598 275 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 RCVRNP35243 200 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 DLSTP36957 453 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 ARMC10Q8N2F6 343 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 OR2M3Q8NG83 312 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 SMAP2Q8WU79 429 aaPredicted RBP18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 AP3S1Q92572 193 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 SLC22A4Q9H015 551 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 TP63Q9H3D4 680 aaPredicted RBP18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 P4HTMQ9NXG6 502 aa18.3■□□□□ 0.52
RIPPLY3-201ENST00000329553 GAAP10253 952 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 SDHAP31040 664 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 DDOSTP39656 456 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 TAB1Q15750 504 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 PLPPR5Q32ZL2 321 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 KLHL36Q8N4N3 616 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 TMEM156Q8N614 296 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 LSM14AQ8ND56 463 aaKnown RBP18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 ZMYND19Q96E35 227 aaPredicted RBP18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 ST6GAL2Q96JF0 529 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 NMNAT2Q9BZQ4 307 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 MEIOCA2RUB1 952 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 TERTO14746 1132 aaKnown RBP18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 EFNA2O43921 213 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 AHSA1O95433 338 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 TXNDC12O95881 172 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 LALBAP00709 142 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 TRAPPC2P0DI81 140 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 TRAPPC2BP0DI82 140 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 GRPRP30550 384 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 ZNF41P51814 821 aaPredicted RBP18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 ACSM1Q08AH1 577 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 SNTA1Q13424 505 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 CCDC92Q53HC0 331 aaPredicted RBP18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 ZNF468Q5VIY5 522 aaPredicted RBP18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 LEG1Q6P5S2 330 aa18.29■□□□□ 0.52
RIPPLY3-201ENST00000329553 SLC7A5P1Q8MH63 180 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms