RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 WDR76Q9H967 626 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 ZNF304Q9HCX3 659 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 MRPL39Q9NYK5 338 aaKnown RBP20.3■□□□□ 0.84
PNKP-201ENST00000322344 IGHV1OR21-1A0A087WYE8 117 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 ALG1L2C9J202 215 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 PSMD9O00233 223 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 ABHD16AO95870 558 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 BGLAPP02818 100 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 PGCP20142 388 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 EGR3Q06889 387 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 KLF9Q13886 244 aaPredicted RBP20.29■□□□□ 0.84
PNKP-201ENST00000322344 Q5BKY6 102 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 EEF1A1P5Q5VTE0 462 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 FAM199XQ6PEV8 388 aaPredicted RBP20.29■□□□□ 0.84
PNKP-201ENST00000322344 CDH24Q86UP0 819 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 D2HGDHQ8N465 521 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 ZNF524Q96C55 264 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 CACNG6Q9BXT2 260 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 SLC25A18Q9H1K4 315 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 PLEKHA1Q9HB21 404 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 STMN3Q9NZ72 180 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 DHCR7Q9UBM7 475 aaKnown RBP20.29■□□□□ 0.84
PNKP-201ENST00000322344 LAMP5Q9UJQ1 280 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 CA14Q9ULX7 337 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 KLHDC2Q9Y2U9 406 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 NDUFB5O43674 189 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 SDC3O75056 442 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 CALCBP10092 127 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 STOMP27105 288 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 DPP4P27487 766 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 EVI2BP34910 448 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 OR1D5P58170 312 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 PLCXD2Q0VAA5 305 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 HES5Q5TA89 166 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 C9orf40Q8IXQ3 194 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 EID2Q8N6I1 236 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 OR1L3Q8NH93 324 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 HYLS1Q96M11 299 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 ACTR6Q9GZN1 396 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 TCF7L1Q9HCS4 588 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 ANKRD10Q9NXR5 420 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 COPS7AQ9UBW8 275 aa20.29■□□□□ 0.84
PNKP-201ENST00000322344 ZNF346Q9UL40 294 aaKnown RBP20.29■□□□□ 0.84
PNKP-201ENST00000322344 MRPS17Q9Y2R5 130 aaKnown RBP20.29■□□□□ 0.84
PNKP-201ENST00000322344 TRAV6A0A075B6T7 132 aa20.28■□□□□ 0.84
PNKP-201ENST00000322344 TRBV5-5A0A0J9YX44 114 aa20.28■□□□□ 0.84
PNKP-201ENST00000322344 TRABD2BA6NFA1 517 aa20.28■□□□□ 0.84
PNKP-201ENST00000322344 SULT1B1O43704 296 aa20.28■□□□□ 0.84
PNKP-201ENST00000322344 DUX1O43812 170 aa20.28■□□□□ 0.84
PNKP-201ENST00000322344 PIAS2O75928 621 aa20.28■□□□□ 0.84
PNKP-201ENST00000322344 RPP14O95059 124 aaKnown RBP20.28■□□□□ 0.84
PNKP-201ENST00000322344 MT-ATP6P00846 226 aa20.28■□□□□ 0.84
PNKP-201ENST00000322344 PRKCAP17252 672 aa20.28■□□□□ 0.84
PNKP-201ENST00000322344 ITPKBP27987 946 aa20.28■□□□□ 0.84
PNKP-201ENST00000322344 NR0B1P51843 470 aaKnown RBP20.28■□□□□ 0.84
PNKP-201ENST00000322344 ESPNLQ6ZVH7 1005 aa20.28■□□□□ 0.84
PNKP-201ENST00000322344 SLC29A4Q7RTT9 530 aa20.28■□□□□ 0.84
PNKP-201ENST00000322344 ZNF433Q8N7K0 673 aaPredicted RBP20.28■□□□□ 0.84
PNKP-201ENST00000322344 UCKL1Q9NWZ5 548 aa20.28■□□□□ 0.84
PNKP-201ENST00000322344 OR6C76A6NM76 312 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 NUDT21O43809 227 aaKnown RBP20.27■□□□□ 0.84
PNKP-201ENST00000322344 RAB40ALP0C0E4 278 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 GP1BBP13224 206 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 GIFP27352 417 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 ZP2Q05996 745 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 SNTB2Q13425 540 aaKnown RBP20.27■□□□□ 0.84
PNKP-201ENST00000322344 NSDHLQ15738 373 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 RNASE12Q5GAN4 147 aaKnown RBP20.27■□□□□ 0.84
PNKP-201ENST00000322344 YOD1Q5VVQ6 348 aaPredicted RBP20.27■□□□□ 0.84
PNKP-201ENST00000322344 CD276Q5ZPR3 534 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 BTN2A1Q7KYR7 527 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 MAMDC2Q7Z304 686 aaPredicted RBP20.27■□□□□ 0.84
PNKP-201ENST00000322344 OR6V1Q8N148 313 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 RAB40AQ8WXH6 277 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 TBL1XR1Q9BZK7 514 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 WWTR1Q9GZV5 400 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 EMC7Q9NPA0 242 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 SEMA5BQ9P283 1151 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 DCTN6O00399 190 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 ECDO95905 644 aaPredicted RBP20.27■□□□□ 0.84
PNKP-201ENST00000322344 IGFBP4P22692 258 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 GDNFP39905 211 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 PNLIPRP2P54317 469 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 FCN2Q15485 313 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 FAM69AQ5T7M9 428 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 MARCH3Q86UD3 253 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 OR1N1Q8NGS0 311 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 OR6N2Q8NGY6 317 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 INTS14Q96SY0 518 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 RTN4RQ9BZR6 473 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 FRRS1LQ9P0K9 344 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 ETV7Q9Y603 341 aa20.27■□□□□ 0.84
PNKP-201ENST00000322344 SLC25A12O75746 678 aa20.26■□□□□ 0.83
PNKP-201ENST00000322344 RAF1P04049 648 aa20.26■□□□□ 0.83
PNKP-201ENST00000322344 ALOX5APP20292 161 aa20.26■□□□□ 0.83
PNKP-201ENST00000322344 MRPS10P82664 201 aaKnown RBP20.26■□□□□ 0.83
PNKP-201ENST00000322344 CBFBQ13951 182 aa20.26■□□□□ 0.83
PNKP-201ENST00000322344 STAC2Q6ZMT1 411 aa20.26■□□□□ 0.83
PNKP-201ENST00000322344 LINGO2Q7L985 606 aa20.26■□□□□ 0.83
PNKP-201ENST00000322344 C1orf216Q8TAB5 229 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms