RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 POLMQ9NP87 494 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ATXN7L1Q9ULK2 861 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 GLI3P10071 1580 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ABCD4O14678 606 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 POU3F3P20264 500 aaPredicted RBP6.55□□□□□ -1.36
SMC1A-201ENST00000322213 SLC19A1P41440 591 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 CX3CR1P49238 355 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 TRA2BP62995 288 aaKnown RBP6.55□□□□□ -1.36
SMC1A-201ENST00000322213 DGCR2P98153 550 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 Q499Y3 187 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 OR2T2Q6IF00 324 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 FAM26EQ8N5C1 309 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 NPRL2Q8WTW4 380 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 EXTL1Q92935 676 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 SMIM3Q9BZL3 60 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 CWH43Q9H720 699 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 PLEKHJ1Q9NW61 149 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 EHFQ9NZC4 300 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 KLHL13Q9P2N7 655 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 GRXCR1A8MXD5 290 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 ARRB2P32121 409 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 RAD52P43351 418 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 AKR1C2P52895 323 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 MRPS34P82930 218 aaKnown RBP6.55□□□□□ -1.36
SMC1A-201ENST00000322213 AKR1C1Q04828 323 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 TMEM115Q12893 351 aaPredicted RBP6.55□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF239Q16600 458 aaKnown RBP6.55□□□□□ -1.36
SMC1A-201ENST00000322213 AARDQ4LEZ3 155 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 ARHGAP40Q5TG30 622 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 DUSP18Q8NEJ0 188 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 OR1J2Q8NGS2 313 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 PHOSPHO1Q8TCT1 267 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 TMEM239Q8WW34 195 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 SPACA1Q9HBV2 294 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 CYSLTR2Q9NS75 346 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 POMT1Q9Y6A1 747 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 TRAV1-2A0A0B4J238 106 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 METTL15P1P0C7V9 234 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 CLCNKAP51800 687 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 SLC16A13Q7RTY0 426 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 STPG2Q8N412 459 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 OR4K15Q8NH41 348 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 AKR1E2Q96JD6 320 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 GHITMQ9H3K2 345 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 DLL4Q9NR61 685 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 PLAGL1Q9UM63 463 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 STRAPQ9Y3F4 350 aaKnown RBP6.55□□□□□ -1.36
SMC1A-201ENST00000322213 GPX2P18283 190 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 PSMB6P28072 239 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 MEF2AQ02078 507 aaPredicted RBP6.55□□□□□ -1.36
SMC1A-201ENST00000322213 FABP9Q0Z7S8 132 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 PDGFRLQ15198 375 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 OR56B2PQ8NGI1 322 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 OR4D6Q8NGJ1 314 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 UPRTQ96BW1 309 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 OR52D1Q9H346 318 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 HHATLQ9HCP6 504 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 TOX4O94842 621 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 RNH1P13489 461 aaKnown RBP6.55□□□□□ -1.36
SMC1A-201ENST00000322213 TM4SF1P30408 202 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 OR10A3P58181 314 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 RAB31Q13636 194 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 BAGE3Q86Y29 109 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 BAGE2Q86Y30 109 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 NUDT21O43809 227 aaKnown RBP6.55□□□□□ -1.36
SMC1A-201ENST00000322213 GPR137BO60478 399 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 FGF7P21781 194 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 HTR6P50406 440 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 SNRPEP62304 92 aaKnown RBP6.55□□□□□ -1.36
SMC1A-201ENST00000322213 SLC22A6Q4U2R8 563 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 PRAMEF8Q5VWM4 474 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 PRAMEF7Q5VXH5 474 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 C22orf39Q6P5X5 142 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 BRI3BPQ8WY22 251 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 A0A0U1RQK1 487 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 A0A1B0GTQ1 180 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 TXNDC12O95881 172 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 CDKN1CP49918 316 aaPredicted RBP6.55□□□□□ -1.36
SMC1A-201ENST00000322213 ELOCQ15369 112 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 TRILQ7L0X0 811 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 GLRX5Q86SX6 157 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 OR9K2Q8NGE7 335 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 ST6GALNAC5Q9BVH7 336 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 ZDHHC4Q9NPG8 344 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 GSN-AS1Q9NRJ2 163 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 RNF181Q9P0P0 153 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 SPG11Q96JI7 2443 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 FAM183AA6NL82 134 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 C11orf98E9PRG8 122 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 SURF4O15260 269 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 LY86O95711 162 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 SEMG2Q02383 582 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 CXCL17Q6UXB2 119 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 COX15Q7KZN9 410 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 OTOP2Q7RTS6 562 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 DTD1Q8TEA8 209 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 TFGQ92734 400 aaPredicted RBP6.55□□□□□ -1.36
SMC1A-201ENST00000322213 CHST8Q9H2A9 424 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 MED20Q9H944 212 aa6.55□□□□□ -1.36
SMC1A-201ENST00000322213 ELOA3CA0A087WX78 387 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms