RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 EFCAB7A8K855 629 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF736B4DX44 427 aaPredicted RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 THY1P04216 161 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 C6P13671 934 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 PRKAR2AP13861 404 aaKnown RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 CPMP14384 443 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 EEF1A1P68104 462 aaKnown RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ALG11Q2TAA5 492 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 LDLRAD3Q86YD5 345 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SLAIN1Q8ND83 568 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 OR1S2Q8NGQ3 325 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 OIT3Q8WWZ8 545 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ZC3H10Q96K80 434 aaKnown RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 PHB2Q99623 299 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SYT4Q9H2B2 425 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TREM1Q9NP99 234 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ENTPD2Q9Y5L3 495 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TRBV6-7A0A0A0MS04 114 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 OR6C68A6NDL8 312 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 BLOC1S5-TXNDC5H3BN57 136 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 TAAR5O14804 337 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 EIF4E2O60573 245 aaKnown RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 MT-ND4LP03901 98 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 CD74P04233 296 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 AMY2AP04746 511 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 NAT2P11245 290 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 RPS4Y1P22090 263 aaKnown RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 FLT3LGP49771 235 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 NKPD1Q17RQ9 610 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 PNLIPRP3Q17RR3 467 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 TMEM255AQ5JRV8 349 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 MRPL2Q5T653 305 aaKnown RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 OR6K6Q8NGW6 343 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 TMEM106AQ96A25 262 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 VRK1Q99986 396 aaPredicted RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ORAI3Q9BRQ5 295 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 NMNAT2Q9BZQ4 307 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 RNF122Q9H9V4 155 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 UQCC1Q9NVA1 299 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 CPNE7Q9UBL6 633 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 IER3IP1Q9Y5U9 82 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 C8orf89P0DMQ9 161 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF528Q3MIS6 628 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 DCST2Q5T1A1 773 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 SPOUT1Q5T280 376 aaKnown RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 OR7E24Q6IFN5 339 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 SLC39A11Q8N1S5 342 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ZDHHC22Q8N966 263 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ELF4Q99607 663 aaPredicted RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 SGIP1Q9BQI5 828 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 TIMM29Q9BSF4 260 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 FAM117AQ9C073 453 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 SLC25A18Q9H1K4 315 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 OR51M1Q9H341 326 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 C20orf141Q9NUB4 165 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 TMEM100Q9NV29 134 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ASH2LQ9UBL3 628 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 HEBP2Q9Y5Z4 205 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 EDDM13A0A1B0GTR0 161 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 NUDT21O43809 227 aaKnown RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 IL2RAP01589 272 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ALG10BQ5I7T1 473 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 C10orf91Q5T1B1 145 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ATPAF1Q5TC12 328 aaPredicted RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 KCTD18Q6PI47 426 aaPredicted RBP4.37□□□□□ -1.71
PTPN13-201ENST00000316707 JAZF1Q86VZ6 243 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 PARGQ86W56 976 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 OR4K17Q8NGC6 315 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 MITD1Q8WV92 249 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 FERD3LQ96RJ6 166 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 POT1Q9NUX5 634 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ASF1BQ9NVP2 202 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 IKZF2Q9UKS7 526 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 MEMO1Q9Y316 297 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 LOC100289279A0A1B0GTE1 492 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 CTAG2O75638 210 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 CD3DP04234 171 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 CRYBA1P05813 215 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 MAOAP21397 527 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 PTAFRP25105 342 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 PSMB6P28072 239 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 GLP1RP43220 463 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 GRK6P43250 576 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 AGERQ15109 404 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 RPE65Q16518 533 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 LY6G5CQ5SRR4 150 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 LIPNQ5VXI9 398 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 RTL10Q7L3V2 364 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 HMGN2P46Q86SG4 172 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 OR51D1Q8NGF3 324 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 FAM3DQ96BQ1 224 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 ALG12Q9BV10 488 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 XKR8Q9H6D3 395 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 TRBV5-7A0A0A0MS05 114 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 OR4C45A6NMZ5 311 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 B3GALT2O43825 422 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 PMELP40967 661 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 POU3F4P49335 361 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 CLDN12P56749 244 aa4.37□□□□□ -1.71
PTPN13-201ENST00000316707 RPS15AP62244 130 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms