RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 UEVLDQ8IX04 471 aa10.57□□□□□ -0.72
SCFD1-201ENST00000311943 OFCC1Q8IZS5 231 aa10.57□□□□□ -0.72
SCFD1-201ENST00000311943 TMEM45BQ96B21 275 aa10.57□□□□□ -0.72
SCFD1-201ENST00000311943 FAM46AQ96IP4 442 aaKnown RBP10.57□□□□□ -0.72
SCFD1-201ENST00000311943 NSMCE2Q96MF7 247 aa10.57□□□□□ -0.72
SCFD1-201ENST00000311943 TNFRSF13CQ96RJ3 184 aa10.57□□□□□ -0.72
SCFD1-201ENST00000311943 ASPNQ9BXN1 380 aa10.57□□□□□ -0.72
SCFD1-201ENST00000311943 CRLF2Q9HC73 371 aa10.57□□□□□ -0.72
SCFD1-201ENST00000311943 CCM2LQ9NUG4 571 aaPredicted RBP10.57□□□□□ -0.72
SCFD1-201ENST00000311943 CREBBPQ92793 2442 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 PRRC2AP48634 2157 aaKnown RBP10.56□□□□□ -0.72
SCFD1-201ENST00000311943 RNF13O43567 381 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 PATE4P0C8F1 98 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 ST3GAL3Q11203 375 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 FGD3Q5JSP0 725 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 ADAM5Q6NVV9 412 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 SYT14Q8NB59 555 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 BPIFA2Q96DR5 249 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 SGTBQ96EQ0 304 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 MPP4Q96JB8 637 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 EPYCQ99645 322 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 NOX3Q9HBY0 568 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 TAS2R16Q9NYV7 291 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 AP3M1Q9Y2T2 418 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 MED31Q9Y3C7 131 aa10.56□□□□□ -0.72
SCFD1-201ENST00000311943 ANKRD17O75179 2603 aaKnown RBP10.56□□□□□ -0.72
SCFD1-201ENST00000311943 OR5H1A6NKK0 313 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 ACOT8O14734 319 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 CLOCKO15516 846 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 CELA3BP08861 270 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 IST1P53990 364 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 FXYD6P3P58550 94 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 ARF1P84077 181 aaKnown RBP10.55□□□□□ -0.72
SCFD1-201ENST00000311943 BSPH1Q075Z2 132 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 TOP3AQ13472 1001 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-201ENST00000311943 P2RY6Q15077 328 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 CEACAM16Q2WEN9 425 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 KLHL17Q6TDP4 642 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 SLC35D2Q76EJ3 337 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 PIK3C3Q8NEB9 887 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 KBTBD8Q8NFY9 601 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 FGFBP3Q8TAT2 258 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 MUS81Q96NY9 551 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 ZNF347Q96SE7 839 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 MAGEL2Q9UJ55 1249 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 RPS6KA6Q9UK32 745 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 SLC25A15Q9Y619 301 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 H7C1C5 153 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 KRT33AO76009 404 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 LCN6P62502 163 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 CBX1P83916 185 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 FMODQ06828 376 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 TRAM2Q15035 370 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 ZNF730Q6ZMV8 503 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 NANOGNBQ7Z5D8 188 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 FOXN4Q96NZ1 517 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 FUZQ9BT04 418 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 CADM1Q9BY67 442 aaKnown RBP10.55□□□□□ -0.72
SCFD1-201ENST00000311943 FKRPQ9H9S5 495 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 UBTD1Q9HAC8 227 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 GPR35Q9HC97 309 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 ZNF226Q9NYT6 803 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 SAMD4AQ9UPU9 718 aaKnown RBP10.55□□□□□ -0.72
SCFD1-201ENST00000311943 ADAM18Q9Y3Q7 739 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 U3KQV3 271 aa10.55□□□□□ -0.72
SCFD1-201ENST00000311943 MCIDASD6RGH6 385 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 VAMP5O95183 116 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 SAGP10523 405 aaPredicted RBP10.54□□□□□ -0.72
SCFD1-201ENST00000311943 RRM2P31350 389 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 SPIBQ01892 262 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 BNIP1Q12981 228 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 TRIM25Q14258 630 aaKnown RBP10.54□□□□□ -0.72
SCFD1-201ENST00000311943 PPA1Q15181 289 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 LRFN4Q6PJG9 635 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 THSD4Q6ZMP0 1018 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 PXKQ7Z7A4 578 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 SCAIQ8N9R8 606 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 LRRC75AQ8NAA5 344 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 STEAP2Q8NFT2 490 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 PARPBPQ9NWS1 579 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 ACTR3BQ9P1U1 418 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 ZNF229Q9UJW7 825 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 CORINQ9Y5Q5 1042 aa10.54□□□□□ -0.72
SCFD1-201ENST00000311943 GYG2O15488 501 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 OR6A2O95222 327 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 SLC2A10O95528 541 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 MT-ATP6P00846 226 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 H1F0P07305 194 aaKnown RBP10.53□□□□□ -0.72
SCFD1-201ENST00000311943 IGFBP1P08833 259 aaPredicted RBP10.53□□□□□ -0.72
SCFD1-201ENST00000311943 B4GALT1P15291 398 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 MPGP29372 298 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 RBM34P42696 430 aaKnown RBP10.53□□□□□ -0.72
SCFD1-201ENST00000311943 OMPP47874 163 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 SLC9A3P48764 834 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 PRKCDQ05655 676 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 PIGFQ07326 219 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 ACKR1Q16570 336 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 TBRG1Q3YBR2 411 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 C5orf46Q6UWT4 87 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 ZER1Q7Z7L7 766 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms