RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 OR6T1Q8NGN1 323 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 SPTSSAQ969W0 71 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 CPNE4Q96A23 557 aaPredicted RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 VSX1Q9NZR4 365 aaPredicted RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 EXO1Q9UQ84 846 aaKnown RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 ECM29Q5VYK3 1845 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 TO15178 435 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 SMAD6O43541 496 aaKnown RBP7.59□□□□□ -1.2
VPS41-202ENST00000310301 POU3F3P20264 500 aaPredicted RBP7.59□□□□□ -1.2
VPS41-202ENST00000310301 CAMK2DQ13557 499 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 RPE65Q16518 533 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 PRSS36Q5K4E3 855 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 RAET1LQ5VY80 246 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 SFXN4Q6P4A7 337 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 ZNF322Q6U7Q0 402 aaPredicted RBP7.59□□□□□ -1.2
VPS41-202ENST00000310301 KANSL1Q7Z3B3 1105 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 C1orf87Q8N0U7 546 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 ZADH2Q8N4Q0 377 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 ANKRD53Q8N9V6 530 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 BTF3L4Q96K17 158 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 BMFQ96LC9 184 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 OR52D1Q9H346 318 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 SLAMF8Q9P0V8 285 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 ZNF281Q9Y2X9 895 aa7.59□□□□□ -1.2
VPS41-202ENST00000310301 TRAV20A0A0B4J274 112 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 OR6C76A6NM76 312 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 D6RAR5 112 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 LATO43561 262 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 GASTP01350 101 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 GABRG2P18507 467 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 ELK1P19419 428 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 SHC1P29353 583 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 CD68P34810 354 aaPredicted RBP7.58□□□□□ -1.2
VPS41-202ENST00000310301 EMP2P54851 167 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 OXA1LQ15070 435 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 SLC5A12Q1EHB4 618 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 EEF1A1P5Q5VTE0 462 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 ADAMTSL4Q6UY14 1074 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 SLC35F3Q8IY50 421 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 NPWQ8N729 165 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 SGK3Q96BR1 496 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 BPIFA2Q96DR5 249 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 SFXN2Q96NB2 322 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 MS4A4EQ96PG1 132 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 UHRF2Q96PU4 802 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 DHRS9Q9BPW9 319 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 ZNF286AQ9HBT8 521 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.58□□□□□ -1.2
VPS41-202ENST00000310301 PRDM6Q9NQX0 595 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 PTRH2Q9Y3E5 179 aaKnown RBP7.58□□□□□ -1.2
VPS41-202ENST00000310301 SLC9B1P1A6NJY1 282 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 F5H5K5 113 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 KITLGP21583 273 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 SRP9P49458 86 aaKnown RBP7.58□□□□□ -1.2
VPS41-202ENST00000310301 TAS2R46P59540 309 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 FIGLAQ6QHK4 219 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 ZNF574Q6ZN55 896 aaPredicted RBP7.58□□□□□ -1.2
VPS41-202ENST00000310301 PNPLA1Q8N8W4 532 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 OR9A2Q8NGT5 310 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 GABRR3A8MPY1 467 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 LRP3O75074 770 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 UBL3O95164 117 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 LCATP04180 440 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 S100A8P05109 93 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 ALDOCP09972 364 aaKnown RBP7.58□□□□□ -1.2
VPS41-202ENST00000310301 CLEC2LP0C7M8 214 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 TRAPPC2P0DI81 140 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 TRAPPC2BP0DI82 140 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 HLA-DOBP13765 273 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 ZNF26P17031 533 aaPredicted RBP7.58□□□□□ -1.2
VPS41-202ENST00000310301 ZNF43P17038 809 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 MC3RP41968 323 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 RAP1AP62834 184 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 ILKQ13418 452 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 OGFOD3Q6PK18 319 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 RDH10Q8IZV5 341 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 SEMA6DQ8NFY4 1073 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 OR13H1Q8NG92 308 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 ZFPM2Q8WW38 1151 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 MSI2Q96DH6 328 aaKnown RBP7.58□□□□□ -1.2
VPS41-202ENST00000310301 OR5M11Q96RB7 305 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 CTRCQ99895 268 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 SLC12A9Q9BXP2 914 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 TWSG1Q9GZX9 223 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 INIPQ9NRY2 104 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 SLC39A9Q9NUM3 307 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 ASH2LQ9UBL3 628 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 ZNF629Q9UEG4 869 aaPredicted RBP7.58□□□□□ -1.2
VPS41-202ENST00000310301 RPH3ALQ9UNE2 315 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 KPTNQ9Y664 436 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 SPI1P17947 270 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 SHC2P98077 582 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 ACSM1Q08AH1 577 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 PHYHD1Q5SRE7 291 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 TMEM244Q5VVB8 128 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 RTL6Q6ICC9 239 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 CLEC9AQ6UXN8 241 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 CD200R1Q8TD46 325 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 CDS1Q92903 461 aa7.58□□□□□ -1.2
VPS41-202ENST00000310301 C20orf27Q9GZN8 174 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms