RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 Q96M85 177 aa10.21□□□□□ -0.78
PTPN7-201ENST00000309017 LMF1Q96S06 567 aa10.21□□□□□ -0.78
PTPN7-201ENST00000309017 NPAS1Q99742 590 aa10.21□□□□□ -0.78
PTPN7-201ENST00000309017 ALG12Q9BV10 488 aa10.21□□□□□ -0.78
PTPN7-201ENST00000309017 SLC7A5P2Q9GIP4 190 aa10.21□□□□□ -0.78
PTPN7-201ENST00000309017 ATG5Q9H1Y0 275 aa10.21□□□□□ -0.78
PTPN7-201ENST00000309017 TAS2R8Q9NYW2 309 aa10.21□□□□□ -0.78
PTPN7-201ENST00000309017 C19orf53Q9UNZ5 99 aaPredicted RBP10.21□□□□□ -0.78
PTPN7-201ENST00000309017 SLC27A6Q9Y2P4 619 aa10.21□□□□□ -0.78
PTPN7-201ENST00000309017 COLEC10Q9Y6Z7 277 aa10.21□□□□□ -0.78
PTPN7-201ENST00000309017 SNRNP200O75643 2136 aaKnown RBP10.21□□□□□ -0.78
PTPN7-201ENST00000309017 A0A1W2PP55 124 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 OR14I1A6ND48 311 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 ZNF749O43361 778 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 RNGTTO60942 597 aaKnown RBP10.2□□□□□ -0.78
PTPN7-201ENST00000309017 MOSPD3O75425 235 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 MTRF1O75570 445 aaKnown RBP10.2□□□□□ -0.78
PTPN7-201ENST00000309017 CALCBP10092 127 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 PRSS3P35030 304 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 DHODHQ02127 395 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 RUNX2Q13950 521 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 LIPNQ5VXI9 398 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 VITQ6UXI7 678 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 ZPLD1Q8TCW7 415 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 GFI1Q99684 422 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 NKX6-2Q9C056 277 aaPredicted RBP10.2□□□□□ -0.78
PTPN7-201ENST00000309017 TRPV4Q9HBA0 871 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 LAMP5Q9UJQ1 280 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 PLEKHA6Q9Y2H5 1048 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 ATG2BQ96BY7 2078 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 A0A0B4J2E0 115 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 A0A1B0GX12 115 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 OR6C68A6NDL8 312 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 EGFP01133 1207 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 CD3DP04234 171 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 TSFMP43897 325 aaKnown RBP10.2□□□□□ -0.78
PTPN7-201ENST00000309017 EMDP50402 254 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 RPS15AP62244 130 aaKnown RBP10.2□□□□□ -0.78
PTPN7-201ENST00000309017 MAT1AQ00266 395 aaKnown RBP10.2□□□□□ -0.78
PTPN7-201ENST00000309017 VN1R4Q7Z5H5 301 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 ZNRF4Q8WWF5 429 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 RELTQ969Z4 430 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 RERGQ96A58 199 aaPredicted RBP10.2□□□□□ -0.78
PTPN7-201ENST00000309017 MRPS24Q96EL2 167 aaKnown RBP10.2□□□□□ -0.78
PTPN7-201ENST00000309017 WBP1Q96G27 269 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 SEC22AQ96IW7 307 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 MRI1Q9BV20 369 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 MED9Q9NWA0 146 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 UPB1Q9UBR1 384 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 ATPIF1Q9UII2 106 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 FBXL21Q9UKT6 434 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 FBXL3Q9UKT7 428 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 ARID1AO14497 2285 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 GLSO94925 669 aaPredicted RBP10.2□□□□□ -0.78
PTPN7-201ENST00000309017 GRK6P43250 576 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 PDSS1Q5T2R2 415 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 STPG1Q5TH74 334 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 RAB12Q6IQ22 244 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 C12orf45Q8N5I9 185 aaPredicted RBP10.2□□□□□ -0.78
PTPN7-201ENST00000309017 GATSQ8NAP1 163 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 OR10Z1Q8NGY1 313 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 RAB7BQ96AH8 199 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 C10orf90Q96M02 699 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 CHST6Q9GZX3 395 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 MYEF2Q9P2K5 600 aaKnown RBP10.2□□□□□ -0.78
PTPN7-201ENST00000309017 PRELID3BQ9Y3B1 194 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 ZNF175Q9Y473 711 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 INSL6Q9Y581 213 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 COL4A3Q01955 1670 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 CACNA1IQ9P0X4 2223 aa10.2□□□□□ -0.78
PTPN7-201ENST00000309017 OR2AT4A6NND4 320 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 F5H0A9 414 aaPredicted RBP10.19□□□□□ -0.78
PTPN7-201ENST00000309017 H7C1C5 153 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 GMFGO60234 142 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 FGF17O60258 216 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 LILRB3O75022 631 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 AMY2AP04746 511 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 NGFRP08138 427 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 UBBP0CG47 229 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 UBCP0CG48 685 aaKnown RBP10.19□□□□□ -0.78
PTPN7-201ENST00000309017 LCN6P62502 163 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 RPS27AP62979 156 aaKnown RBP10.19□□□□□ -0.78
PTPN7-201ENST00000309017 UBA52P62987 128 aaKnown RBP10.19□□□□□ -0.78
PTPN7-201ENST00000309017 UBXN2BQ14CS0 331 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 STEAP2Q8NFT2 490 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 LRRC3BQ96PB8 259 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 SERINC2Q96SA4 455 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 KCNK15Q9H427 330 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 POFUT1Q9H488 388 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 ZCCHC4Q9H5U6 513 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 DUSP22Q9NRW4 184 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 ASF1BQ9NVP2 202 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 DAPP1Q9UN19 280 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 ETV7Q9Y603 341 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 KIF26AQ9ULI4 1882 aaPredicted RBP10.19□□□□□ -0.78
PTPN7-201ENST00000309017 PEBP1P30086 187 aaKnown RBP10.19□□□□□ -0.78
PTPN7-201ENST00000309017 SNRPNP63162 240 aaKnown RBP10.19□□□□□ -0.78
PTPN7-201ENST00000309017 PLA2G7Q13093 441 aa10.19□□□□□ -0.78
PTPN7-201ENST00000309017 ALKBH1Q13686 389 aaKnown RBP10.19□□□□□ -0.78
PTPN7-201ENST00000309017 PRAMEF17Q5VTA0 474 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms