RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PCED1AQ9H1Q7 454 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 BEX1Q9HBH7 125 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 CLEC4AQ9UMR7 237 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 H7C1C5 153 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 ZNF264O43296 627 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 SELENOFO60613 162 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 IL33O95760 270 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 EIF4EP06730 217 aaKnown RBP19.96■□□□□ 0.79
TPM4-201ENST00000300933 BTG1P62324 171 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 LCN6P62502 163 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 ARHGAP11AQ6P4F7 1023 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 GUSBP11Q6P575 273 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 SYT9Q86SS6 491 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 LUZP2Q86TE4 346 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 ZNF501Q96CX3 271 aaPredicted RBP19.96■□□□□ 0.79
TPM4-201ENST00000300933 GHITMQ9H3K2 345 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 AUP1Q9Y679 476 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 A0A1W2PRG6 482 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 MPC2O95563 127 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 BTCP35070 178 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 EGR4Q05215 589 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 LTBQ06643 244 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 RIN1Q13671 783 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 LGALSLQ3ZCW2 172 aaPredicted RBP19.95■□□□□ 0.78
TPM4-201ENST00000300933 FNDC7Q5VTL7 733 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 FAM69BQ5VUD6 431 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 SAMD12Q8N8I0 201 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 HSD17B8Q92506 261 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 C1QTNF6Q9BXI9 259 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 CLEC4MQ9H2X3 399 aaPredicted RBP19.95■□□□□ 0.78
TPM4-201ENST00000300933 ERVMER34-1Q9H9K5 563 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 CACNG2Q9Y698 323 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 CNTRLQ7Z7A1 2325 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 TEX13CA0A0J9YWL9 993 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 CFDP00746 253 aaPredicted RBP19.95■□□□□ 0.78
TPM4-201ENST00000300933 IFNGP01579 166 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 TACR3P29371 465 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 OR10A3P58181 314 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 SLC41A2Q96JW4 573 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 SLC22A11Q9NSA0 550 aa19.95■□□□□ 0.78
TPM4-201ENST00000300933 TCRBV16S1A1N1A0A5B0 115 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 IDSB3KWA1 339 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 SLC19A2O60779 497 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 CTRB1P17538 263 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 TALDO1P37837 337 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 ZNF117Q03924 483 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 EBPQ15125 230 aaKnown RBP19.94■□□□□ 0.78
TPM4-201ENST00000300933 CTRB2Q6GPI1 263 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 CMIPQ8IY22 773 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 ZNF527Q8NB42 609 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 CLDN23Q96B33 292 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 OR51J1Q9H342 316 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 TRIM36Q9NQ86 728 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 ICAM5Q9UMF0 924 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 CELSR3Q9NYQ7 3312 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 RPS10-NUDT3A0A1W2PQS6 291 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 TRIM77I1YAP6 450 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 GDF9O60383 454 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 MT-ND5P03915 603 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 PTBP1P26599 531 aaKnown RBP eCLIP19.94■□□□□ 0.78
TPM4-201ENST00000300933 IL12BP29460 328 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 PSMB10P40306 273 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 ELAVL1Q15717 326 aaKnown RBP19.94■□□□□ 0.78
TPM4-201ENST00000300933 GRK1Q15835 563 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 HLA-DQA1Q5Y7H0 255 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 GPR139Q6DWJ6 353 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 WBP2NLQ6ICG8 309 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 KCTD20Q7Z5Y7 419 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 ESX1Q8N693 406 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 NPEPL1Q8NDH3 523 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 SORCS2Q96PQ0 1159 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 OR1F2PQ96R84 312 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 MMACHCQ9Y4U1 282 aa19.94■□□□□ 0.78
TPM4-201ENST00000300933 CDKN2AP42771 156 aaKnown RBP19.93■□□□□ 0.78
TPM4-201ENST00000300933 ATG4DQ86TL0 474 aaPredicted RBP19.93■□□□□ 0.78
TPM4-201ENST00000300933 ZNF511Q8NB15 262 aa19.93■□□□□ 0.78
TPM4-201ENST00000300933 MED12Q93074 2177 aa19.93■□□□□ 0.78
TPM4-201ENST00000300933 SCMH1Q96GD3 660 aa19.93■□□□□ 0.78
TPM4-201ENST00000300933 PELOQ9BRX2 385 aaKnown RBP19.93■□□□□ 0.78
TPM4-201ENST00000300933 DUSP15Q9H1R2 295 aaPredicted RBP19.93■□□□□ 0.78
TPM4-201ENST00000300933 EMC7Q9NPA0 242 aa19.93■□□□□ 0.78
TPM4-201ENST00000300933 NANSQ9NR45 359 aa19.93■□□□□ 0.78
TPM4-201ENST00000300933 COPS3Q9UNS2 423 aa19.93■□□□□ 0.78
TPM4-201ENST00000300933 ZNF337Q9Y3M9 751 aa19.93■□□□□ 0.78
TPM4-201ENST00000300933 A0A1B0GX78 115 aa19.93■□□□□ 0.78
TPM4-201ENST00000300933 HRGP04196 525 aa19.93■□□□□ 0.78
TPM4-201ENST00000300933 NAGAP17050 411 aa19.93■□□□□ 0.78
TPM4-201ENST00000300933 ACSM1Q08AH1 577 aa19.93■□□□□ 0.78
TPM4-201ENST00000300933 COL28A1Q2UY09 1125 aa19.93■□□□□ 0.78
TPM4-201ENST00000300933 CHMP1BQ7LBR1 199 aa19.93■□□□□ 0.78
TPM4-201ENST00000300933 ORAI1Q96D31 301 aa19.93■□□□□ 0.78
TPM4-201ENST00000300933 A0A087WV48 116 aa19.92■□□□□ 0.78
TPM4-201ENST00000300933 GIFP27352 417 aa19.92■□□□□ 0.78
TPM4-201ENST00000300933 RPS27P42677 84 aaKnown RBP19.92■□□□□ 0.78
TPM4-201ENST00000300933 GRK6P43250 576 aa19.92■□□□□ 0.78
TPM4-201ENST00000300933 ARRB1P49407 418 aaPredicted RBP19.92■□□□□ 0.78
TPM4-201ENST00000300933 LEG1Q6P5S2 330 aa19.92■□□□□ 0.78
TPM4-201ENST00000300933 CEACAM19Q7Z692 300 aa19.92■□□□□ 0.78
TPM4-201ENST00000300933 ABHD1Q96SE0 405 aa19.92■□□□□ 0.78
TPM4-201ENST00000300933 CHRNA10Q9GZZ6 450 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms