RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SMAD7O15105 426 aaKnown RBP18.78■□□□□ 0.6
SMCO4-201ENST00000298966 ZNF208O43345 1280 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 SMPD2O60906 423 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 SMIM18P0DKX4 95 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 CTSSP25774 331 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 OPRM1P35372 400 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 MASP1P48740 699 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 CSNK2BP67870 215 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 IL5RAQ01344 420 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 CRYZQ08257 329 aaKnown RBP18.78■□□□□ 0.6
SMCO4-201ENST00000298966 GLYR1Q49A26 553 aaPredicted RBP18.78■□□□□ 0.6
SMCO4-201ENST00000298966 SLX4IPQ5VYV7 408 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 NSUN5P2Q63ZY6 315 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 TIGD3Q6B0B8 471 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 OR1J4Q8NGS1 313 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 SMPDL3BQ92485 455 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 ZNF566Q969W8 418 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 DACH2Q96NX9 599 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 TIMP4Q99727 224 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 DSN1Q9H410 356 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 MEPEQ9NQ76 525 aaPredicted RBP18.78■□□□□ 0.6
SMCO4-201ENST00000298966 MED17Q9NVC6 651 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 MED11Q9P086 117 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 BAIAP2Q9UQB8 552 aa18.78■□□□□ 0.6
SMCO4-201ENST00000298966 TMED7-TICAM2A0A0A6YYA0 188 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 A8MVM7 634 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 PIP5K1CO60331 668 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 CBR3O75828 277 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 NTN1O95631 604 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 MT-ATP6P00846 226 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 TP53P04637 393 aaPredicted RBP18.77■□□□□ 0.6
SMCO4-201ENST00000298966 BMP7P18075 431 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 GPR4P46093 362 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 AGFG1P52594 562 aaKnown RBP18.77■□□□□ 0.6
SMCO4-201ENST00000298966 DSCR4P56555 118 aaPredicted RBP18.77■□□□□ 0.6
SMCO4-201ENST00000298966 CXCR4P61073 352 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 APOFQ13790 326 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 MAD2L1BPQ15013 274 aaPredicted RBP18.77■□□□□ 0.6
SMCO4-201ENST00000298966 CTU2Q2VPK5 515 aaKnown RBP18.77■□□□□ 0.6
SMCO4-201ENST00000298966 C6orf141Q5SZD1 244 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 BICRALQ6AI39 1079 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 ZNF620Q6ZNG0 422 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 WDSUB1Q8N9V3 476 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 OR52L1Q8NGH7 329 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 PFN4Q8NHR9 129 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 C1GALT1C1Q96EU7 318 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 Q96MF0 132 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 MRPS26Q9BYN8 205 aaKnown RBP18.77■□□□□ 0.6
SMCO4-201ENST00000298966 PRDM14Q9GZV8 571 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 PROK2Q9HC23 129 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 SERINC1Q9NRX5 453 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 BLOC1S6Q9UL45 172 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 CAMK2AQ9UQM7 478 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 TMED7Q9Y3B3 224 aa18.77■□□□□ 0.6
SMCO4-201ENST00000298966 MRPS18CQ9Y3D5 142 aaKnown RBP18.77■□□□□ 0.6
SMCO4-201ENST00000298966 TRAV36DV7A0A075B6V5 113 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 A0A1W2PPR1 153 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 CD8B2A6NJW9 211 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 INAFM1C9JVW0 142 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 CASKO14936 926 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 OR2T1O43869 369 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 TRIM3O75382 744 aaPredicted RBP18.76■□□□□ 0.59
SMCO4-201ENST00000298966 IL18BPO95998 194 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 SAGP10523 405 aaPredicted RBP18.76■□□□□ 0.59
SMCO4-201ENST00000298966 CLK1P49759 484 aaKnown RBP18.76■□□□□ 0.59
SMCO4-201ENST00000298966 LSM11P83369 360 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMCO4-201ENST00000298966 CDK5R2Q13319 367 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 MFSD13AQ14CX5 517 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 TOMM34Q15785 309 aaPredicted RBP18.76■□□□□ 0.59
SMCO4-201ENST00000298966 PLPPR5Q32ZL2 321 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 SLC27A4Q6P1M0 643 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 CASP12Q6UXS9 341 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 TSPAN14Q8NG11 270 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 SLC25A43Q8WUT9 341 aaPredicted RBP18.76■□□□□ 0.59
SMCO4-201ENST00000298966 PIGTQ969N2 578 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 TRIB1Q96RU8 372 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 GPA33Q99795 319 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 RBM24Q9BX46 236 aaKnown RBP18.76■□□□□ 0.59
SMCO4-201ENST00000298966 IMPAD1Q9NX62 359 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 JKAMPQ9P055 326 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 CHRNA9Q9UGM1 479 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 ZNF337Q9Y3M9 751 aa18.76■□□□□ 0.59
SMCO4-201ENST00000298966 FBN1P35555 2871 aaKnown RBP18.75■□□□□ 0.59
SMCO4-201ENST00000298966 IGKV1D-42A0A075B6H8 117 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 SH3D21A4FU49 640 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 TRIM64CA6NLI5 447 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 TRAPPC6AO75865 159 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 OR7A10O76100 309 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 HMGN1P05114 100 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 CCDC159P0C7I6 412 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 ZNF17P17021 662 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 MAKP20794 623 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 ELK4P28324 431 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 GIPRP48546 466 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 GABARAPL2P60520 117 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 TUBA4AP68366 448 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 CDK5Q00535 292 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 C12orf73Q69YU5 71 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 PRSS57Q6UWY2 283 aa18.75■□□□□ 0.59
SMCO4-201ENST00000298966 ADGRG3Q86Y34 549 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms