RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 OR5K3A6NET4 321 aa22.21■■□□□ 1.15
SPTSSA-201ENST00000298130 TNFP01375 233 aa22.21■■□□□ 1.15
SPTSSA-201ENST00000298130 ARMC6Q6NXE6 501 aa22.21■■□□□ 1.15
SPTSSA-201ENST00000298130 MED25Q71SY5 747 aa22.21■■□□□ 1.15
SPTSSA-201ENST00000298130 GLB1L2Q8IW92 636 aa22.21■■□□□ 1.15
SPTSSA-201ENST00000298130 THEM6Q8WUY1 208 aa22.21■■□□□ 1.15
SPTSSA-201ENST00000298130 PPP1R14AQ96A00 147 aa22.21■■□□□ 1.15
SPTSSA-201ENST00000298130 MMABQ96EY8 250 aaPredicted RBP22.21■■□□□ 1.15
SPTSSA-201ENST00000298130 GABARAPH6UMI1 98 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 ITPKBP27987 946 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 GRK6P43250 576 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 GAS6Q14393 721 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 COL28A1Q2UY09 1125 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 ALG10Q5BKT4 473 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 GPR139Q6DWJ6 353 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 MAMSTRQ6ZN01 415 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 SLC35F3Q8IY50 421 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 OR5AK2Q8NH90 309 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 KTI12Q96EK9 354 aaPredicted RBP22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 AMELYQ99218 206 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 MAP3K3Q99759 626 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 MRPL39Q9NYK5 338 aaKnown RBP22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 ZNF224Q9NZL3 707 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 DOK2O60496 412 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 HOXC4P09017 264 aaPredicted RBP22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 HPGDP15428 266 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 GPR3P46089 330 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 GRM7Q14831 915 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 CMIPQ8IY22 773 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 OR4D10Q8NGI6 311 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 HOXB13Q92826 284 aaPredicted RBP22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 GTF2A1LQ9UNN4 478 aa22.2■■□□□ 1.14
SPTSSA-201ENST00000298130 A0A1B0GVI7 797 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 LINC00862A6NCI5 91 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 UPK3AO75631 287 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 PLGP00747 810 aaPredicted RBP22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 MST1P26927 711 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 AKT2P31751 481 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 EFNB2P52799 333 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 GUCA2AQ02747 115 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 C1QL3Q5VWW1 255 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 OR5M10Q6IEU7 315 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 LRRC20Q8TCA0 184 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 NRSN2Q9GZP1 204 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 M0R233 179 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 CTDSPLO15194 276 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 AKR7A3O95154 331 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 RNH1P13489 461 aaKnown RBP22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 POU3F2P20265 443 aaPredicted RBP22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 TAS2R20P59543 309 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 EGR4Q05215 589 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 FBXO46Q6PJ61 603 aaPredicted RBP22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 OR6V1Q8N148 313 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 MEIOBQ8N635 442 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 OR1F2PQ96R84 312 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 RTN4RQ9BZR6 473 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 PRDM9Q9NQV7 894 aa22.19■■□□□ 1.14
SPTSSA-201ENST00000298130 POM121CA8CG34 1229 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 C11orf98E9PRG8 122 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 ARPC3O15145 178 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 GPRIN2O60269 458 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 ITGA10O75578 1167 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 CTSEP14091 401 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 CENPAP49450 140 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 ZNF684Q5T5D7 378 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 TTC9Q92623 222 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 ELMOD3Q96FG2 381 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 C7orf50Q9BRJ6 194 aaKnown RBP22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 ACTR6Q9GZN1 396 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 SYT4Q9H2B2 425 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 ATG2AQ2TAZ0 1938 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 PDCD5O14737 125 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 TNFRSF10CO14798 259 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 EIF2B5Q13144 721 aaKnown RBP22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 CBFBQ13951 182 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 ZNF74Q16587 644 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 SFRP5Q5T4F7 317 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 SLC35D2Q76EJ3 337 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 FAM220AQ7Z4H9 259 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 C19orf47Q8N9M1 422 aaKnown RBP22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 GPBAR1Q8TDU6 330 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 LPAR4Q99677 370 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 TWSG1Q9GZX9 223 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 PIPOXQ9P0Z9 390 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 UBQLN2Q9UHD9 624 aa22.18■■□□□ 1.14
SPTSSA-201ENST00000298130 PRAMEF2O60811 474 aa22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 CXCL2P19875 107 aa22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 Q499Y3 187 aa22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 TMEM106AQ96A25 262 aa22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 G6PC3Q9BUM1 346 aa22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 CTNSO60931 367 aa22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 CAPZA2P47755 286 aa22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 ART1P52961 327 aa22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 RPS4XP62701 263 aaKnown RBP22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 ALKBH1Q13686 389 aaKnown RBP22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 C2orf68Q2NKX9 166 aa22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 DND1Q8IYX4 353 aaKnown RBP22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 DEFB119Q8N690 84 aa22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 ZNF676Q8N7Q3 588 aa22.17■■□□□ 1.14
SPTSSA-201ENST00000298130 PNO1Q9NRX1 252 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms