RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 FOXK1P85037 733 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 ZNF45Q02386 682 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 POU4F2Q12837 409 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 TP53I3Q53FA7 332 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 LINC01590Q5TEZ4 76 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 ARL9Q6T311 187 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 VASH1Q7L8A9 365 aaPredicted RBP19.28■□□□□ 0.68
SOX17-201ENST00000297316 OR6K6Q8NGW6 343 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 MARCH7Q9H992 704 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 FKRPQ9H9S5 495 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 TRIM36Q9NQ86 728 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 FBXL2Q9UKC9 423 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 GSTK1Q9Y2Q3 226 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 MUC6Q6W4X9 2439 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 ASPMQ8IZT6 3477 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 IQCMA0A1B0GVH7 501 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 NCR1O76036 304 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 IL10RAQ13651 578 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 PON3Q15166 354 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 MESTQ5EB52 335 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 TMEM164Q5U3C3 297 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 ZNF468Q5VIY5 522 aaPredicted RBP19.28■□□□□ 0.68
SOX17-201ENST00000297316 LYSMD2Q8IV50 215 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 SLC35F2Q8IXU6 374 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 EXD3Q8N9H8 876 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 ZFHX2Q9C0A1 2572 aaPredicted RBP19.27■□□□□ 0.68
SOX17-201ENST00000297316 TRAV36DV7A0A075B6V5 113 aa19.27■□□□□ 0.68
SOX17-201ENST00000297316 DCTN6O00399 190 aa19.27■□□□□ 0.68
SOX17-201ENST00000297316 NPIPB7O75200 414 aa19.27■□□□□ 0.68
SOX17-201ENST00000297316 IL11P20809 199 aa19.27■□□□□ 0.68
SOX17-201ENST00000297316 SDHAP31040 664 aa19.27■□□□□ 0.68
SOX17-201ENST00000297316 ACTC1P68032 377 aa19.27■□□□□ 0.68
SOX17-201ENST00000297316 ACTA1P68133 377 aa19.27■□□□□ 0.68
SOX17-201ENST00000297316 FOXF1Q12946 379 aa19.27■□□□□ 0.68
SOX17-201ENST00000297316 STEAP3Q658P3 488 aa19.27■□□□□ 0.68
SOX17-201ENST00000297316 PPIL3Q9H2H8 161 aaKnown RBP19.27■□□□□ 0.68
SOX17-201ENST00000297316 MIXL1Q9H2W2 232 aa19.27■□□□□ 0.68
SOX17-201ENST00000297316 TAS2R5Q9NYW4 299 aa19.27■□□□□ 0.68
SOX17-201ENST00000297316 RAB40ALP0C0E4 278 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 DLSTP36957 453 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 B3GNTL1Q67FW5 361 aaPredicted RBP19.26■□□□□ 0.67
SOX17-201ENST00000297316 RPS19BP1Q86WX3 136 aaKnown RBP19.26■□□□□ 0.67
SOX17-201ENST00000297316 ANKRD10Q9NXR5 420 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 PCDHGB6Q9Y5F9 930 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 A0A1W2PQ72 361 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 G3V3Y1 287 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 APEHP13798 732 aaKnown RBP19.26■□□□□ 0.67
SOX17-201ENST00000297316 RPS15P62841 145 aaKnown RBP19.26■□□□□ 0.67
SOX17-201ENST00000297316 SLC3A1Q07837 685 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 SSPNQ14714 243 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 LCN1P1Q5VSP4 162 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 C1orf140Q5VVS0 124 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 JAZF1Q86VZ6 243 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 POMGNT2Q8NAT1 580 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 OR5M1Q8NGP8 315 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 NEIL3Q8TAT5 605 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 CEP19Q96LK0 163 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 TMEM165Q9HC07 324 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 SLC6A5Q9Y345 797 aa19.26■□□□□ 0.67
SOX17-201ENST00000297316 SLC35F4A4IF30 521 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 C11orf98E9PRG8 122 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 CASKO14936 926 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 TXNDC12O95881 172 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 IGHEP01854 428 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 CCL3P10147 92 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 GRPRP30550 384 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 ACVR1BP36896 505 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 RUNX1T1Q06455 604 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 EIF3IQ13347 325 aaKnown RBP19.25■□□□□ 0.67
SOX17-201ENST00000297316 GPR50Q13585 617 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.25■□□□□ 0.67
SOX17-201ENST00000297316 SPANXN2Q5MJ10 180 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 FAM27D1Q5T7N8 215 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 WDSUB1Q8N9V3 476 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 ZNF511Q8NB15 262 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 ARL5BQ96KC2 179 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 PGLYRP3Q96LB9 341 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 SLC30A2Q9BRI3 323 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 ABCB9Q9NP78 766 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 P4HTMQ9NXG6 502 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 ST6GALNAC2Q9UJ37 374 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 NOX1Q9Y5S8 564 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 V9GYH0 126 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 FREM3P0C091 2139 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 LOC101059948A0A1B0GTJ6 334 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 A8MVM7 634 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 PRR32B1ATL7 298 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 EFNA2O43921 213 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 RGS9O75916 674 aaPredicted RBP19.25■□□□□ 0.67
SOX17-201ENST00000297316 HIST1H2ABP04908 130 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 OR2T7P0C7T2 308 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 LGALS3BPQ08380 585 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 KRR1Q13601 381 aaKnown RBP19.25■□□□□ 0.67
SOX17-201ENST00000297316 ZMAT1Q5H9K5 638 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 SLC35D3Q5M8T2 416 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 HIST3H2AQ7L7L0 130 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 GPALPP1Q8IXQ4 340 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 OR2T27Q8NH04 317 aa19.25■□□□□ 0.67
SOX17-201ENST00000297316 TMEM234Q8WY98 164 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms