RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 KDM8Q8N371 416 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 PLPP7Q8NBV4 271 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 ZNF680Q8NEM1 530 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 SLC30A7Q8NEW0 376 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 SDSLQ96GA7 329 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 CRB3Q9BUF7 120 aa13.13□□□□□ -0.31
COL1A2-201ENST00000297268 PRAMEF27A3QJZ7 478 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 IGHG1P01857 330 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 RAB38P57729 211 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 DSC1Q08554 894 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 GLYATL3Q5SZD4 288 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 PRAMEF9Q5VWM5 478 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 H3F3CQ6NXT2 135 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 SHISA6Q6ZSJ9 500 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 PTOV1Q86YD1 416 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 NLGN4YQ8NFZ3 816 aaPredicted RBP13.12□□□□□ -0.31
COL1A2-201ENST00000297268 RASD2Q96D21 266 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 MAST2Q6P0Q8 1798 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 EFCAB7A8K855 629 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 A8MXE2 369 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 CCSO14618 274 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 GPR137BO60478 399 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 LILRB5O75023 590 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 CBR1P16152 277 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 SELENOVP59797 346 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 HTD2P86397 168 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 FBXW12Q6X9E4 464 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 SLC39A5Q6ZMH5 540 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 MRPL21Q7Z2W9 205 aaKnown RBP13.12□□□□□ -0.31
COL1A2-201ENST00000297268 LIX1LQ8IVB5 337 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 IL23AQ9NPF7 189 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 KIR2DS5A0A0G2JLQ3 304 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 A0A0G2JNG1 304 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 KIR2DS3K7RE56 304 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 SLC2A10O95528 541 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 PMP2P02689 132 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 ADRB1P08588 477 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 OMGP23515 440 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 KIR2DS5Q14953 304 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 ZFP82Q8N141 532 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 ZBTB44Q8NCP5 570 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 WFDC5Q8TCV5 224 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 SLIRPQ9GZT3 109 aaKnown RBP13.12□□□□□ -0.31
COL1A2-201ENST00000297268 HINT3Q9NQE9 182 aaKnown RBP13.12□□□□□ -0.31
COL1A2-201ENST00000297268 HRH3Q9Y5N1 445 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 RAB19A4D1S5 217 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 VSTM5A8MXK1 200 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 EIF4EP06730 217 aaKnown RBP13.12□□□□□ -0.31
COL1A2-201ENST00000297268 SLC6A12P48065 614 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 CSNK1G2P78368 415 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 RBM39Q14498 530 aaKnown RBP13.12□□□□□ -0.31
COL1A2-201ENST00000297268 RAB30Q15771 203 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 MEP1BQ16820 701 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 FAM219BQ5XKK7 198 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 ABHD17CQ6PCB6 329 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 ADGRE4PQ86SQ3 457 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 LINC01465Q8N7H1 131 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 ARRDC3Q96B67 414 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 OR52A5Q9H2C5 316 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 ACOXLQ9NUZ1 547 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 CA5BQ9Y2D0 317 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 MRPS28Q9Y2Q9 187 aaKnown RBP13.12□□□□□ -0.31
COL1A2-201ENST00000297268 GPR55Q9Y2T6 319 aaPredicted RBP13.12□□□□□ -0.31
COL1A2-201ENST00000297268 EMC9Q9Y3B6 208 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 ADAM18Q9Y3Q7 739 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 PIAS3Q9Y6X2 628 aa13.12□□□□□ -0.31
COL1A2-201ENST00000297268 AHDC1Q5TGY3 1603 aaPredicted RBP13.11□□□□□ -0.31
COL1A2-201ENST00000297268 NAGAP17050 411 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 RAD52P43351 418 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 SRYQ05066 204 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 YOD1Q5VVQ6 348 aaPredicted RBP13.11□□□□□ -0.31
COL1A2-201ENST00000297268 MDGA2Q7Z553 956 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 TEX19Q8NA77 164 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.11□□□□□ -0.31
COL1A2-201ENST00000297268 CREBZFQ9NS37 354 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 SLC5A10A0PJK1 596 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 BLACEA4D250 179 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 D6RAR5 112 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 SUSD5O60279 629 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 GLCEO94923 617 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 MT-CO2P00403 227 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 MLC1Q15049 377 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 SOHLH1Q5JUK2 328 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 SLC35D3Q5M8T2 416 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 PAPD4Q6PIY7 484 aaKnown RBP13.11□□□□□ -0.31
COL1A2-201ENST00000297268 ZNF286AQ9HBT8 521 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 P2RY10O00398 339 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 MSTNO14793 375 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 BCL6P41182 706 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 MAT1AQ00266 395 aaKnown RBP13.11□□□□□ -0.31
COL1A2-201ENST00000297268 NKG7Q16617 165 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 PLCXD3Q63HM9 321 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 CCDC190Q86UF4 302 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 FRMD1Q8N878 549 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 ST8SIA2Q92186 375 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 UQCC2Q9BRT2 126 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 EPHX3Q9H6B9 360 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 ISYNA1Q9NPH2 558 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 MUTYHQ9UIF7 546 aa13.11□□□□□ -0.31
COL1A2-201ENST00000297268 PGFP49763 221 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms