RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 GPR35Q9HC97 309 aa17.93■□□□□ 0.46
RAB28-201ENST00000288723 LAMP3Q9UQV4 416 aa17.93■□□□□ 0.46
RAB28-201ENST00000288723 NDUFAB1O14561 156 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 MT-ND1P03886 318 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 ASAH2BP0C7U1 165 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 CD40P25942 277 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 PRPS1P60891 318 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 TUBA1BP68363 451 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 TUBA4AP68366 448 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 LSM11P83369 360 aaKnown RBP eCLIP17.92■□□□□ 0.46
RAB28-201ENST00000288723 ARF1P84077 181 aaKnown RBP17.92■□□□□ 0.46
RAB28-201ENST00000288723 CAMK2DQ13557 499 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 TMEM108Q6UXF1 575 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 TUBA1AQ71U36 451 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 PIK3C3Q8NEB9 887 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 WFDC11Q8NEX6 87 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 FBXW5Q969U6 566 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 HSH2DQ96JZ2 352 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 PIP5K1AQ99755 562 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 POLR2J2Q9GZM3 115 aaKnown RBP17.92■□□□□ 0.46
RAB28-201ENST00000288723 POLR2J3Q9H1A7 115 aaKnown RBP17.92■□□□□ 0.46
RAB28-201ENST00000288723 TAGLN3Q9UI15 199 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 ZNF229Q9UJW7 825 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 AMDHD2Q9Y303 409 aa17.92■□□□□ 0.46
RAB28-201ENST00000288723 ZNF469Q96JG9 3925 aaPredicted RBP17.92■□□□□ 0.46
RAB28-201ENST00000288723 RNF13O43567 381 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 AKAP8O43823 692 aaKnown RBP17.91■□□□□ 0.46
RAB28-201ENST00000288723 DCTN3O75935 186 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 HIST1H2ABP04908 130 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 IFNW1P05000 195 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 IFNGR1P15260 489 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 TCN1P20061 433 aaPredicted RBP17.91■□□□□ 0.46
RAB28-201ENST00000288723 NKX6-1P78426 367 aaPredicted RBP17.91■□□□□ 0.46
RAB28-201ENST00000288723 CEACAM16Q2WEN9 425 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 KLHL17Q6TDP4 642 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 KLHL24Q6TFL4 600 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 HIST3H2AQ7L7L0 130 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 IGFBPL1Q8WX77 278 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 BCL2L2Q92843 193 aaPredicted RBP17.91■□□□□ 0.46
RAB28-201ENST00000288723 HIST1H2ACQ93077 130 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 PERPQ96FX8 193 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 PRRC1Q96M27 445 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 BLOC1S5-TXNDC5H3BN57 136 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 PIP5K1CO60331 668 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 SEC14L2O76054 403 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 FUT1P19526 365 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 RBM34P42696 430 aaKnown RBP17.91■□□□□ 0.46
RAB28-201ENST00000288723 IFI44LQ53G44 452 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 GLYATQ6IB77 296 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 SLC22A25Q6T423 547 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 TGIF2LYQ8IUE0 185 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 KRTAP1-3Q8IUG1 177 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 C20orf196Q8IYI0 205 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 NELFAQ9H3P2 528 aa17.91■□□□□ 0.46
RAB28-201ENST00000288723 CISD1Q9NZ45 108 aaKnown RBP17.91■□□□□ 0.46
RAB28-201ENST00000288723 ZNF726A6NNF4 738 aa17.9■□□□□ 0.46
RAB28-201ENST00000288723 RPL36A-HNRNPH2H7BZ11 118 aa17.9■□□□□ 0.46
RAB28-201ENST00000288723 FFAR1O14842 300 aa17.9■□□□□ 0.46
RAB28-201ENST00000288723 SOD3P08294 240 aa17.9■□□□□ 0.46
RAB28-201ENST00000288723 PTAFRP25105 342 aa17.9■□□□□ 0.46
RAB28-201ENST00000288723 MSX2P35548 267 aaPredicted RBP17.9■□□□□ 0.46
RAB28-201ENST00000288723 BIDP55957 195 aa17.9■□□□□ 0.46
RAB28-201ENST00000288723 ST3GAL3Q11203 375 aa17.9■□□□□ 0.46
RAB28-201ENST00000288723 SLC35D2Q76EJ3 337 aa17.9■□□□□ 0.46
RAB28-201ENST00000288723 NANOGNBQ7Z5D8 188 aa17.9■□□□□ 0.46
RAB28-201ENST00000288723 SMAP2Q8WU79 429 aaPredicted RBP17.9■□□□□ 0.46
RAB28-201ENST00000288723 TMEM171Q8WVE6 324 aa17.9■□□□□ 0.46
RAB28-201ENST00000288723 GEMIN6Q8WXD5 167 aaKnown RBP17.9■□□□□ 0.46
RAB28-201ENST00000288723 SGTBQ96EQ0 304 aa17.9■□□□□ 0.46
RAB28-201ENST00000288723 MED31Q9Y3C7 131 aa17.9■□□□□ 0.46
RAB28-201ENST00000288723 OR7A10O76100 309 aa17.89■□□□□ 0.45
RAB28-201ENST00000288723 WNT11O96014 354 aa17.89■□□□□ 0.45
RAB28-201ENST00000288723 THRBP10828 461 aa17.89■□□□□ 0.45
RAB28-201ENST00000288723 CDH11P55287 796 aa17.89■□□□□ 0.45
RAB28-201ENST00000288723 UBE2NP61088 152 aaKnown RBP17.89■□□□□ 0.45
RAB28-201ENST00000288723 ZP4Q12836 540 aa17.89■□□□□ 0.45
RAB28-201ENST00000288723 MELKQ14680 651 aa17.89■□□□□ 0.45
RAB28-201ENST00000288723 ANKRD16Q6P6B7 361 aa17.89■□□□□ 0.45
RAB28-201ENST00000288723 MEX3DQ86XN8 651 aaKnown RBP17.89■□□□□ 0.45
RAB28-201ENST00000288723 FITM2Q8N6M3 262 aa17.89■□□□□ 0.45
RAB28-201ENST00000288723 ANKS4BQ8N8V4 417 aa17.89■□□□□ 0.45
RAB28-201ENST00000288723 BOD1Q96IK1 185 aa17.89■□□□□ 0.45
RAB28-201ENST00000288723 HS6ST2Q96MM7 605 aa17.89■□□□□ 0.45
RAB28-201ENST00000288723 FNDC11Q9BVV2 318 aa17.89■□□□□ 0.45
RAB28-201ENST00000288723 POU2F3Q9UKI9 436 aa17.89■□□□□ 0.45
RAB28-201ENST00000288723 F13BP05160 661 aa17.88■□□□□ 0.45
RAB28-201ENST00000288723 PGGHGQ32M88 737 aa17.88■□□□□ 0.45
RAB28-201ENST00000288723 ANKK1Q8NFD2 765 aa17.88■□□□□ 0.45
RAB28-201ENST00000288723 OR6N1Q8NGY5 312 aa17.88■□□□□ 0.45
RAB28-201ENST00000288723 CDRT15Q96T59 188 aa17.88■□□□□ 0.45
RAB28-201ENST00000288723 MAN2C1Q9NTJ4 1040 aa17.88■□□□□ 0.45
RAB28-201ENST00000288723 MED13LQ71F56 2210 aa17.88■□□□□ 0.45
RAB28-201ENST00000288723 ARID1AO14497 2285 aa17.88■□□□□ 0.45
RAB28-201ENST00000288723 DANCRP0C864 163 aa17.88■□□□□ 0.45
RAB28-201ENST00000288723 CD99P14209 185 aa17.88■□□□□ 0.45
RAB28-201ENST00000288723 RPL18Q07020 188 aaKnown RBP17.88■□□□□ 0.45
RAB28-201ENST00000288723 TSEN54Q7Z6J9 526 aaKnown RBP17.88■□□□□ 0.45
RAB28-201ENST00000288723 PGAM4Q8N0Y7 254 aa17.88■□□□□ 0.45
RAB28-201ENST00000288723 FAM86B1Q8N7N1 296 aa17.88■□□□□ 0.45
RAB28-201ENST00000288723 LRR1Q96L50 414 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms