RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 OR2S2Q9NQN1 319 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.29□□□□□ -0.44
SCAF4-201ENST00000286835 CENPMQ9NSP4 180 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 ASF1BQ9NVP2 202 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 HPF1Q9NWY4 346 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 NTMQ9P121 344 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 ZMIZ1Q9ULJ6 1067 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 SPTA1P02549 2419 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 KRBOX1C9JBD0 128 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 ZIC2O95409 532 aaPredicted RBP12.29□□□□□ -0.44
SCAF4-201ENST00000286835 P2RX1P51575 399 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 DUSP8Q13202 625 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 PRAMEF8Q5VWM4 474 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 PRAMEF7Q5VXH5 474 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 MAMSTRQ6ZN01 415 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 INO80EQ8NBZ0 244 aaPredicted RBP12.29□□□□□ -0.44
SCAF4-201ENST00000286835 WDR89Q96FK6 387 aaPredicted RBP12.29□□□□□ -0.44
SCAF4-201ENST00000286835 KCNK15Q9H427 330 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 UPB1Q9UBR1 384 aa12.29□□□□□ -0.44
SCAF4-201ENST00000286835 TSPAN11A1L157 253 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 ZFPL1O95159 310 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 RAB3DO95716 219 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 RENP00797 406 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 TMIGD3P0DMS9 266 aaPredicted RBP12.28□□□□□ -0.44
SCAF4-201ENST00000286835 UGT2B7P16662 529 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 CXCL2P19875 107 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 THBS2P35442 1172 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 EMDP50402 254 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 RBMS2Q15434 407 aaKnown RBP12.28□□□□□ -0.44
SCAF4-201ENST00000286835 TMEM255AQ5JRV8 349 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 DMKNQ6E0U4 476 aaPredicted RBP12.28□□□□□ -0.44
SCAF4-201ENST00000286835 GALNTL5Q7Z4T8 443 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 ZAR1Q86SH2 424 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 SERINC2Q96SA4 455 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 MEPEQ9NQ76 525 aaPredicted RBP12.28□□□□□ -0.44
SCAF4-201ENST00000286835 TBC1D29Q9UFV1 150 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 HEBP2Q9Y5Z4 205 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 H0Y8X5 98 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 CYB5AP00167 134 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 CD2P06729 351 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 CTHP32929 405 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 FRKP42685 505 aaPredicted RBP12.28□□□□□ -0.44
SCAF4-201ENST00000286835 RASGRP3Q8IV61 690 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 CSNK1A1LQ8N752 337 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 OR11G2Q8NGC1 345 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 UBL7Q96S82 380 aaPredicted RBP12.28□□□□□ -0.44
SCAF4-201ENST00000286835 PTDSS2Q9BVG9 487 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 FGF22Q9HCT0 170 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 MRPS33Q9Y291 106 aaKnown RBP12.28□□□□□ -0.44
SCAF4-201ENST00000286835 SPAG17Q6Q759 2223 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 TRPM7Q96QT4 1865 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 RLN2P04090 185 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 FXYD6P3P58550 94 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 ACSM1Q08AH1 577 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 STK11Q15831 433 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 TMEM88Q6PEY1 159 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 ZNF550Q7Z398 422 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 CCDC36Q8IYA8 594 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 SDR16C5Q8N3Y7 309 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 PLPP7Q8NBV4 271 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 SLC6A7Q99884 636 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 IFT46Q9NQC8 304 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 GMEB2Q9UKD1 530 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 DAPP1Q9UN19 280 aa12.28□□□□□ -0.44
SCAF4-201ENST00000286835 OTOL1A6NHN0 477 aaPredicted RBP12.27□□□□□ -0.44
SCAF4-201ENST00000286835 H0YGG7 62 aa12.27□□□□□ -0.44
SCAF4-201ENST00000286835 AIPO00170 330 aa12.27□□□□□ -0.44
SCAF4-201ENST00000286835 GIPP09681 153 aaPredicted RBP12.27□□□□□ -0.44
SCAF4-201ENST00000286835 LUMP51884 338 aaPredicted RBP12.27□□□□□ -0.44
SCAF4-201ENST00000286835 ZNF136P52737 540 aa12.27□□□□□ -0.44
SCAF4-201ENST00000286835 ZP1P60852 638 aa12.27□□□□□ -0.44
SCAF4-201ENST00000286835 ARF3P61204 181 aaPredicted RBP12.27□□□□□ -0.44
SCAF4-201ENST00000286835 KLF9Q13886 244 aaPredicted RBP12.27□□□□□ -0.44
SCAF4-201ENST00000286835 HLXQ14774 488 aaPredicted RBP12.27□□□□□ -0.44
SCAF4-201ENST00000286835 CDNFQ49AH0 187 aa12.27□□□□□ -0.44
SCAF4-201ENST00000286835 SLC35F3Q8IY50 421 aa12.27□□□□□ -0.44
SCAF4-201ENST00000286835 POMGNT2Q8NAT1 580 aa12.27□□□□□ -0.44
SCAF4-201ENST00000286835 OR9A4Q8NGU2 314 aa12.27□□□□□ -0.44
SCAF4-201ENST00000286835 SCARB1Q8WTV0 552 aa12.27□□□□□ -0.44
SCAF4-201ENST00000286835 PATE1Q8WXA2 126 aa12.27□□□□□ -0.44
SCAF4-201ENST00000286835 AICDAQ9GZX7 198 aa12.27□□□□□ -0.44
SCAF4-201ENST00000286835 ATXN7L1Q9ULK2 861 aaPredicted RBP12.27□□□□□ -0.44
SCAF4-201ENST00000286835 POLR1DQ9Y2S0 133 aa12.27□□□□□ -0.44
SCAF4-201ENST00000286835 RTTNQ86VV8 2226 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 A0A1B0GUH1 482 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 GPR75O95800 540 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 SPI1P17947 270 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 DRD1P21728 446 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 GPR143P51810 404 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 ALG10Q5BKT4 473 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 ULK3Q6PHR2 472 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 LRFN4Q6PJG9 635 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 UNQ6126/PRO20091Q6UXV3 157 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 OVCH1Q7RTY7 1134 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 ADGRG3Q86Y34 549 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.27□□□□□ -0.45
SCAF4-201ENST00000286835 THAP6Q8TBB0 222 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 RADILQ96JH8 1075 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 APOOQ9BUR5 198 aa12.27□□□□□ -0.45
SCAF4-201ENST00000286835 C8orf33Q9H7E9 229 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms