RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CA14Q9ULX7 337 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 HS3ST2Q9Y278 367 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 C17orf113A0A1B0GUU1 675 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 B4GALT3O60512 393 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 SERPINA7P05543 415 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 IGFBP1P08833 259 aaPredicted RBP15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 MAT1AQ00266 395 aaKnown RBP15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 C19orf57Q0VDD7 668 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 CHTF18Q8WVB6 975 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 UBQLN3Q9H347 655 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 ASB1Q9Y576 335 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 MYH9P35579 1960 aaKnown RBP15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 M0QYG6 137 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 LGALS8O00214 317 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 CPT2P23786 658 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 DUSP3P51452 185 aaPredicted RBP15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 ZMAT1Q5H9K5 638 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 HIST2H3PS2Q5TEC6 136 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 ADGRG3Q86Y34 549 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 OR51D1Q8NGF3 324 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 OR2A14Q96R47 310 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 STRADBQ9C0K7 418 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 GABARAPL1Q9H0R8 117 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 MUTYHQ9UIF7 546 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 KPTNQ9Y664 436 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 NME2P22392 152 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 EBPQ15125 230 aaKnown RBP15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 SOHLH1Q5JUK2 328 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 PAQR6Q6TCH4 344 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 ESPNLQ6ZVH7 1005 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 FAM57BQ71RH2 274 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 NLRP8Q86W28 1048 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 A0A1B0GWA3 101 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 TMEM212A6NML5 194 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 ATP1B1P05026 303 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 F3P13726 295 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 NPPBP16860 134 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 OMGP23515 440 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 SNRPGP62308 76 aaKnown RBP15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 RPL23AP62750 156 aaKnown RBP15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 RIMKLAQ8IXN7 391 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 MFSD9Q8NBP5 474 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 TTC9Q92623 222 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 NMNAT2Q9BZQ4 307 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 NCDNQ9UBB6 729 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 ZNF264O43296 627 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 PXNP49023 591 aaPredicted RBP15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 STEAP1BQ6NZ63 245 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 FBXW12Q6X9E4 464 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 OR5D18Q8NGL1 313 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 TAAR8Q969N4 342 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 SLC25A37Q9NYZ2 338 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 PCDHGA1Q9Y5H4 931 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 NPFFR2Q9Y5X5 522 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 GJE1A6NN92 205 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 AGAP14A8MT82 685 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 SCGB1D1O95968 90 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 TACR3P29371 465 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 OR1D4P47884 311 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 SYT14P1Q58G82 188 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 FAM160A2Q8N612 972 aaPredicted RBP15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 SELENOIQ9C0D9 397 aa15.23■□□□□ 0.03
SH3RF1-201ENST00000284637 HIDE1A8MVS5 230 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 TMEM88Q6PEY1 159 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 LHFPL5Q8TAF8 219 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 SCML1Q9UN30 329 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 TP53TG5Q9Y2B4 290 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 KIR2DS5A0A0G2JLQ3 304 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 A0A0G2JNG1 304 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 KIR2DS3K7RE56 304 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 FPR3P25089 353 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 PLA2G7Q13093 441 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 KIR2DS5Q14953 304 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 FAM71E1Q6IPT2 247 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 SLC16A11Q8NCK7 471 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 OR52N1Q8NH53 320 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 ACER3Q9NUN7 267 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 NDUFB11Q9NX14 153 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 BRWD1Q9NSI6 2320 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 LRIT2A6NDA9 550 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 ZP2Q05996 745 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 HSF5Q4G112 596 aaPredicted RBP15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 YIF1BQ5BJH7 314 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 ZNF561Q8N587 486 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 RSPRY1Q96DX4 576 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 PDCD1LG2Q9BQ51 273 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 RNF32Q9H0A6 362 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 WIF1Q9Y5W5 379 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 PRAMEF26H0Y7S4 382 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 EVX1P49640 407 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 EEF1A1P68104 462 aaKnown RBP15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 SLC30A7Q8NEW0 376 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 CMSS1Q9BQ75 279 aaKnown RBP15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 CHST8Q9H2A9 424 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 IKZF5Q9H5V7 419 aa15.22■□□□□ 0.03
SH3RF1-201ENST00000284637 CNR1P21554 472 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 POLR2HP52434 150 aaKnown RBP15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 EFNA3P52797 238 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 SNTB1Q13884 538 aaKnown RBP15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 RDH10Q8IZV5 341 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms