RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 ALKBH1Q13686 389 aaKnown RBP10.1□□□□□ -0.79
MSH3-201ENST00000265081 ZFP69Q49AA0 526 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 WDR45BQ5MNZ6 344 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 RABEPKQ7Z6M1 372 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 SNX33Q8WV41 574 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 OMA1Q96E52 524 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 NDEL1Q9GZM8 345 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 RANGRFQ9HD47 186 aaPredicted RBP10.1□□□□□ -0.79
MSH3-201ENST00000265081 RPRD1BQ9NQG5 326 aaKnown RBP10.1□□□□□ -0.79
MSH3-201ENST00000265081 MALT1Q9UDY8 824 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 NUFIP1Q9UHK0 495 aaKnown RBP10.1□□□□□ -0.79
MSH3-201ENST00000265081 TMEM72A0PK05 275 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 OR4C45A6NMZ5 311 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 FAM25AB3EWG3 89 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 FAM25CB3EWG5 89 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 FAM25GB3EWG6 89 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 GNB5O14775 395 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 ZNF432O94892 652 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 DKK1O94907 266 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 CCR9P51686 369 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 SLC16A1P53985 500 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 CTXN1P60606 82 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 TOMM34Q15785 309 aaPredicted RBP10.09□□□□□ -0.79
MSH3-201ENST00000265081 TMEM53Q6P2H8 277 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 JAZF1Q86VZ6 243 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 ADGRG3Q86Y34 549 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 APCDD1LQ8NCL9 501 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 NSMAFQ92636 917 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 C8orf44Q96CB5 159 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 GTPBP2Q9BX10 602 aaKnown RBP10.09□□□□□ -0.79
MSH3-201ENST00000265081 SLA2Q9H6Q3 261 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 NOX4Q9NPH5 578 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 COPZ2Q9P299 210 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 CLCA3PQ9Y6N3 262 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 TMEM200CA6NKL6 621 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 VSTM2BA6NLU5 285 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 ORC5O43913 435 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 TALDO1P37837 337 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 SUMO3P55854 103 aaPredicted RBP10.09□□□□□ -0.79
MSH3-201ENST00000265081 GHDCQ8N2G8 530 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 PRSS35Q8N3Z0 413 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 DEFB119Q8N690 84 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 OR2T4Q8NH00 348 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 NUBPLQ8TB37 319 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 ZFAND1Q8TCF1 268 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 SHDQ96IW2 340 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 ADOQ96SZ5 270 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 PDCD1LG2Q9BQ51 273 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 MRPL39Q9NYK5 338 aaKnown RBP10.09□□□□□ -0.79
MSH3-201ENST00000265081 NLKQ9UBE8 527 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 ZNF346Q9UL40 294 aaKnown RBP10.09□□□□□ -0.79
MSH3-201ENST00000265081 NUBP2Q9Y5Y2 271 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 ETV7Q9Y603 341 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 FKBP7Q9Y680 259 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 TACSTD2P09758 323 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 PGCP20142 388 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 EFR3AQ14156 821 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 Q499Y3 187 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 STPG1Q5TH74 334 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 OR8K3Q8NH51 312 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 OTOSQ8NHW6 89 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 DEDD2Q8WXF8 326 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 FOXQ1Q9C009 403 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 EMC3Q9P0I2 261 aa10.09□□□□□ -0.79
MSH3-201ENST00000265081 DHCR7Q9UBM7 475 aaKnown RBP10.09□□□□□ -0.79
MSH3-201ENST00000265081 IDSB3KWA1 339 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 AKR7A3O95154 331 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 Q5BKY6 102 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 ELFN2Q5R3F8 820 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 SNAP47Q5SQN1 464 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 FAM166AQ6J272 317 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 ZNF574Q6ZN55 896 aaPredicted RBP10.08□□□□□ -0.8
MSH3-201ENST00000265081 TMPRSS9Q7Z410 1059 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 MARCH3Q86UD3 253 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 OR51L1Q8NGJ5 315 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 KLHL13Q9P2N7 655 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 GRHPRQ9UBQ7 328 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 SRPK3Q9UPE1 567 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 BCAT2O15382 392 aaPredicted RBP10.08□□□□□ -0.8
MSH3-201ENST00000265081 PRKNO60260 465 aaPredicted RBP10.08□□□□□ -0.8
MSH3-201ENST00000265081 YES1P07947 543 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 TDGF1P13385 188 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 ADRA2CP18825 462 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 GZMKP49863 264 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 ZP2Q05996 745 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 PEAR1Q5VY43 1037 aaPredicted RBP10.08□□□□□ -0.8
MSH3-201ENST00000265081 OLFML2AQ68BL7 652 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 GRINAQ7Z429 371 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 GATSQ8NAP1 163 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 CCDC74AQ96AQ1 378 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 FYTTD1Q96QD9 318 aaKnown RBP10.08□□□□□ -0.8
MSH3-201ENST00000265081 OR8D2Q9GZM6 311 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 SLC26A1Q9H2B4 701 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 SLCO1C1Q9NYB5 712 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 NPTNQ9Y639 398 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 PLPP3O14495 311 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 LDOC1O95751 146 aaPredicted RBP10.08□□□□□ -0.8
MSH3-201ENST00000265081 SNRPBP14678 240 aaKnown RBP10.08□□□□□ -0.8
MSH3-201ENST00000265081 MAPK3P27361 379 aaPredicted RBP10.08□□□□□ -0.8
MSH3-201ENST00000265081 PTH2RP49190 550 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms