RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 OR51S1Q8NGJ8 323 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 OR14A16Q8NHC5 309 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 DUSP19Q8WTR2 217 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 PIPOXQ9P0Z9 390 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 GPR89AB7ZAQ6 455 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 ACOT7O00154 380 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 TGM6O95932 706 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 GPR89BP0CG08 455 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 VSIG10L2P0DP72 767 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 RPS4Y1P22090 263 aaKnown RBP11.32□□□□□ -0.6
CHMP3-201ENST00000263856 ARFIP1P53367 373 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 ADPRHP54922 357 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 DEFA5Q01523 94 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 C1orf61Q13536 156 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 FHL5Q5TD97 284 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 DCAF12L2Q5VW00 463 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 NDUFAF7Q7L592 441 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 SYS1Q8N2H4 156 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 RCBTB1Q8NDN9 531 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 OR4C16Q8NGL9 310 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 PHOSPHO1Q8TCT1 267 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 BADQ92934 168 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 MRPL48Q96GC5 212 aaKnown RBP11.32□□□□□ -0.6
CHMP3-201ENST00000263856 RPP25Q9BUL9 199 aaKnown RBP11.32□□□□□ -0.6
CHMP3-201ENST00000263856 TRIOO75962 3097 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 MCRIP1C9JLW8 97 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 DCTN6O00399 190 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 GSTZ1O43708 216 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-201ENST00000263856 NUDT14O95848 222 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 IFNGR1P15260 489 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 ADRA2CP18825 462 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 S100A11P31949 105 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 CCKBRP32239 447 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 EFNB2P52799 333 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 HLXQ14774 488 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-201ENST00000263856 TMUB2Q71RG4 321 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 ZNF627Q7L945 461 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 TEX19Q8NA77 164 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 SLC2A12Q8TD20 617 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 HAO2Q9NYQ3 351 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 ERVK-19Q9WJR5 959 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 FARSAQ9Y285 508 aaKnown RBP11.31□□□□□ -0.6
CHMP3-201ENST00000263856 IGF2P01344 180 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 SEC61A1P61619 476 aaKnown RBP11.31□□□□□ -0.6
CHMP3-201ENST00000263856 SCGB2B2Q4G0G5 96 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 ELP2Q6IA86 826 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 ADGRG3Q86Y34 549 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 GRAMD2AQ8IUY3 354 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 SLC35F3Q8IY50 421 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 PRR22Q8IZ63 422 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 STPG2Q8N412 459 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 MOGAT1Q96PD6 335 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 MYADMQ96S97 322 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 STACQ99469 402 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 MICU1Q9BPX6 476 aa11.31□□□□□ -0.6
CHMP3-201ENST00000263856 ANKRD20A5PA0PJZ0 165 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 FAM25EA8MYX2 175 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 RAG2P55895 527 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 H2BFSP57053 126 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 RAP2BP61225 183 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 BTG2P78543 158 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 C17orf107Q6ZR85 190 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 CA13Q8N1Q1 262 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 ZNF563Q8TA94 476 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 PPP1R14AQ96A00 147 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 CHST6Q9GZX3 395 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 WDR76Q9H967 626 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 IL23AQ9NPF7 189 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.3□□□□□ -0.6
CHMP3-201ENST00000263856 MED11Q9P086 117 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 PILRAQ9UKJ1 303 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 LINC01553A4QN01 128 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 OR5K3A6NET4 321 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 F5H5P2 479 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 HTRA4P83105 476 aaPredicted RBP11.3□□□□□ -0.6
CHMP3-201ENST00000263856 FHL1Q13642 323 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 ITPRIPL2Q3MIP1 535 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 Q499Y3 187 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 NUDT18Q6ZVK8 323 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 SLC51BQ86UW2 128 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 ZNF227Q86WZ6 799 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 PLPP7Q8NBV4 271 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 NT5CQ8TCD5 201 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 ATOH1Q92858 354 aaPredicted RBP11.3□□□□□ -0.6
CHMP3-201ENST00000263856 SLC25A36Q96CQ1 311 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 ATG5Q9H1Y0 275 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 NPDC1Q9NQX5 325 aaPredicted RBP11.3□□□□□ -0.6
CHMP3-201ENST00000263856 TAS2R5Q9NYW4 299 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 FRRS1LQ9P0K9 344 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 PLSCR5A0PG75 271 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 NAP1L6A6NFF2 107 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 M0QYG6 137 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 CD3DP04234 171 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 GIPP09681 153 aaPredicted RBP11.3□□□□□ -0.6
CHMP3-201ENST00000263856 MAOAP21397 527 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 FAUP35544 74 aaKnown RBP11.3□□□□□ -0.6
CHMP3-201ENST00000263856 VEGFBP49765 207 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 GPR143P51810 404 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 ALKBH1Q13686 389 aaKnown RBP11.3□□□□□ -0.6
CHMP3-201ENST00000263856 GRM7Q14831 915 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms