RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TMEM205Q6UW68 189 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 MAMSTRQ6ZN01 415 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 NPEPL1Q8NDH3 523 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 OR4D10Q8NGI6 311 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 OR5M8Q8NGP6 311 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 ASB12Q8WXK4 309 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 COMMD4Q9H0A8 199 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 SYNPO2LQ9H987 977 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 MYOFQ9NZM1 2061 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 IMPA2O14732 288 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 CTAG2O75638 210 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 CFPP27918 469 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 ARHGDIBP52566 201 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 FHL1Q13642 323 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 ALG10BQ5I7T1 473 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 EXOSC6Q5RKV6 272 aaKnown RBP11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 CST9Q5W186 159 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 SLC16A9Q7RTY1 509 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 LDLRAD3Q86YD5 345 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 PUSL1Q8N0Z8 303 aaKnown RBP11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 TMEM229BQ8NBD8 167 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 RAB7BQ96AH8 199 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 CCDC74AQ96AQ1 378 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 NMNAT2Q9BZQ4 307 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 SLCO5A1Q9H2Y9 848 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 ADAP2Q9NPF8 381 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF629Q9UEG4 869 aaPredicted RBP11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 PCDHB10Q9UN67 800 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 MOKQ9UQ07 419 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 TRAV18A0A075B6X5 111 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 ABHD14A-ACY1A0A1B0GW23 586 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 PRICKLE3O43900 615 aaPredicted RBP11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 BRINP1O60477 761 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 RDH16O75452 317 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 CXCL10P02778 98 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 PCCBP05166 539 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 TMIGD3P0DMS9 266 aaPredicted RBP11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 CPMP14384 443 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 ADRA2CP18825 462 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 GPR143P51810 404 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 ELAVL3Q14576 367 aaKnown RBP11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 MLF2Q15773 248 aaPredicted RBP11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 FNDC3BQ53EP0 1204 aaKnown RBP11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 LY6G6FQ5SQ64 297 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 C3orf33Q6P1S2 294 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 SKA3Q8IX90 412 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 GABRG1Q8N1C3 465 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 INO80EQ8NBZ0 244 aaPredicted RBP11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 CLEC1AQ8NC01 280 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 SERINC2Q96SA4 455 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 FAM117AQ9C073 453 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 ZFP57Q9NU63 452 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF107Q9UII5 783 aaPredicted RBP11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 KCNE5Q9UJ90 142 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 CARHSP1Q9Y2V2 147 aaKnown RBP11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 DENND4CQ5VZ89 1909 aa11.31□□□□□ -0.6
CHMP2B-201ENST00000263780 A0A1B0GTI1 187 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 LILRB3O75022 631 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 RAB3DO95716 219 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 CD3DP04234 171 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 CISD3P0C7P0 127 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF10P21506 573 aaPredicted RBP11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 CD34P28906 385 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 DLSTP36957 453 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 ADH7P40394 386 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 SOX2P48431 317 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 RPS15AP62244 130 aaKnown RBP11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 DCDP81605 110 aaKnown RBP11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 FGL2Q14314 439 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 TAF13Q15543 124 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF77Q15935 545 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 SWI5Q1ZZU3 235 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 HNRNPA1L2Q32P51 320 aaKnown RBP11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 AVPI1Q5T686 147 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 STPG1Q5TH74 334 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 ULK3Q6PHR2 472 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 NDUFAF7Q7L592 441 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 FAM122BQ7Z309 247 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF595Q8IYB9 648 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 SLAIN1Q8ND83 568 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 THAP6Q8TBB0 222 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 GPR148Q8TDV2 347 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 ARL11Q969Q4 196 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 ADAD1Q96M93 576 aaKnown RBP11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 NMNAT3Q96T66 252 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 TSPAN10Q9H1Z9 355 aaPredicted RBP11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 CCDC86Q9H6F5 360 aaKnown RBP11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 SFXN1Q9H9B4 322 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 TRPV4Q9HBA0 871 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 FLRT3Q9NZU0 649 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 WNT6Q9Y6F9 365 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 HEATR5BQ9P2D3 2071 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 TCF20Q9UGU0 1960 aaKnown RBP11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 TRBV5-7A0A0A0MS05 114 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 URADA6NGE7 173 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 IDSB3KWA1 339 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 GPR31O00270 319 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 SIGLEC5O15389 551 aa11.3□□□□□ -0.6
CHMP2B-201ENST00000263780 IFI6P09912 130 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms