RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 SGPP1Q9BX95 441 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 SLC25A31Q9H0C2 315 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 PLEKHA3Q9HB20 300 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 FGF22Q9HCT0 170 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 TMED7Q9Y3B3 224 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 POM121CA8CG34 1229 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 FOSL2P15408 326 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 ZNF44P15621 663 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 ITGB8P26012 769 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 CTHP32929 405 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 NR0B2Q15466 257 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 BCL2A1Q16548 175 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 LYSMD4Q5XG99 296 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 VN1R2Q8NFZ6 395 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 OR51D1Q8NGF3 324 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 OR6M1Q8NGM8 313 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 MIB2Q96AX9 1013 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 RADILQ96JH8 1075 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 SDF2Q99470 211 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 MICU1Q9BPX6 476 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 SLC25A21Q9BQT8 299 aaPredicted RBP9.93□□□□□ -0.82
CD44-201ENST00000263398 SMIM3Q9BZL3 60 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 METTL9Q9H1A3 318 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 RAB9BQ9NP90 201 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 C19orf53Q9UNZ5 99 aaPredicted RBP9.93□□□□□ -0.82
CD44-201ENST00000263398 ADAM18Q9Y3Q7 739 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 UBR3Q6ZT12 1888 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 LAMB2P55268 1798 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 K7ESM1 405 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 SURF4O15260 269 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 ZNF254O75437 659 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 GPX5O75715 221 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 POU3F2P20265 443 aaPredicted RBP9.93□□□□□ -0.82
CD44-201ENST00000263398 CDKN3Q16667 212 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 SOWAHCQ53LP3 525 aaPredicted RBP9.93□□□□□ -0.82
CD44-201ENST00000263398 ZNF385BQ569K4 471 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 TMEM201Q5SNT2 666 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 CD276Q5ZPR3 534 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 ACSM5Q6NUN0 579 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 TCTN3Q6NUS6 607 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 SELENOIQ9C0D9 397 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 HRH4Q9H3N8 390 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 ZNF286AQ9HBT8 521 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 ATP13A2Q9NQ11 1180 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 FBXO7Q9Y3I1 522 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.93□□□□□ -0.82
CD44-201ENST00000263398 COL5A3P25940 1745 aaPredicted RBP9.92□□□□□ -0.82
CD44-201ENST00000263398 A0A1W2PR48 441 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 TMPRSS11DO60235 418 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 FZD6O60353 706 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 TSPAN12O95859 305 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 WDPCPO95876 746 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 TGM6O95932 706 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 MT-CO2P00403 227 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 SRMP19623 302 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 ETV5P41161 510 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 EPHA5P54756 1037 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 LIM2P55344 173 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 ERVK-16P61578 105 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 ASAH1Q13510 395 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 HTR4Q13639 388 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 ZNF77Q15935 545 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 C11orf91Q3C1V1 193 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 ESPNLQ6ZVH7 1005 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 VASH1Q7L8A9 365 aaPredicted RBP9.92□□□□□ -0.82
CD44-201ENST00000263398 OR5T1Q8NG75 326 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 MAP3K3Q99759 626 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 LIN7BQ9HAP6 207 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 FGF21Q9NSA1 209 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 TP53TG5Q9Y2B4 290 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 NUMBLQ9Y6R0 609 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 PTPRZ1P23471 2315 aaPredicted RBP9.92□□□□□ -0.82
CD44-201ENST00000263398 RAB6AP20340 208 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 IRS1P35568 1242 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 ETV1P50549 477 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 HSD17B7P56937 341 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 PLCXD3Q63HM9 321 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 ANKRD34AQ69YU3 496 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 ZNF620Q6ZNG0 422 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 ADIPOR2Q86V24 386 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 COMTD1Q86VU5 262 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 PRR18Q8N4B5 295 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 SLC22A24Q8N4F4 322 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 PIGCQ92535 297 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 WBP2Q969T9 261 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 FAM3DQ96BQ1 224 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 SEC22AQ96IW7 307 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 BCL2L10Q9HD36 194 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 HINT3Q9NQE9 182 aaKnown RBP9.92□□□□□ -0.82
CD44-201ENST00000263398 TMEM100Q9NV29 134 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 TLCD2A6NGC4 264 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 A8MVM7 634 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 PIP5K1CO60331 668 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 OR7C1O76099 320 aaPredicted RBP9.92□□□□□ -0.82
CD44-201ENST00000263398 GDF1P27539 372 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 DYRK1AQ13627 763 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 IHHQ14623 411 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 NDUFB11Q9NX14 153 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 STEAP1Q9UHE8 339 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 ATPIF1Q9UII2 106 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms