RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 CT45A6P0DMU7 189 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 CT45A5P0DMU8 189 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 CT45A7P0DMV0 189 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 CT45A8P0DMV1 189 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 CT45A9P0DMV2 189 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 CT45A2Q5DJT8 189 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 CT45A1Q5HYN5 189 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 WDR5BQ86VZ2 330 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 SULF2Q8IWU5 870 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 OR56B1Q8NGI3 324 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 CT45A3Q8NHU0 189 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 FAM234AQ9H0X4 552 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 A0A1B0GWA3 101 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 UBCP0CG48 685 aaKnown RBP12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 GPX3P22352 226 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 PTH2RP49190 550 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 IDH3GP51553 393 aaPredicted RBP12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 DSCR4P56555 118 aaPredicted RBP12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 TSPAN31Q12999 210 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 LILRA3Q8N6C8 439 aaPredicted RBP12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 OR2V1Q8NHB1 315 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 ELP4Q96EB1 424 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 P4HTMQ9NXG6 502 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 PLA2G3Q9NZ20 509 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 PIGLQ9Y2B2 252 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 A6NHS1 94 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 C5orf67F2Z3F1 127 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 ZNF195O14628 629 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 GPR137BO60478 399 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 BDKRB2P30411 391 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 RFC3P40938 356 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 PPICP45877 212 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 CD83Q01151 205 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 KEAP1Q14145 624 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 FAM53BQ14153 422 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 ZNF718Q3SXZ3 478 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 COL13A1Q5TAT6 717 aaPredicted RBP12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 PIWIL3Q7Z3Z3 882 aaKnown RBP12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 FRG2CA6NGY1 282 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 GFYI3L273 518 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 AGTR1P30556 359 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 HOXD12P35452 270 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 CAV2P51636 162 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 SMIM15Q7Z3B0 74 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 ST8SIA1Q92185 356 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 OR5B12Q96R08 314 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 CITED4Q96RK1 184 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 MDFIC2A0A1B0GVS7 189 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 ZNF736B4DX44 427 aaPredicted RBP12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 INMT-MINDY4F8WBC2 141 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 AKAIN1P0CW23 69 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 GSK3AP49840 483 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 RAC1P63000 192 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 SRSF5Q13243 272 aaKnown RBP12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 CBLL1Q75N03 491 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 TMEM151AQ8N4L1 468 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 LOXL4Q96JB6 756 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 CCDC32Q9BV29 185 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 AK6Q9Y3D8 172 aaKnown RBP12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 DOCK1Q14185 1865 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 ANKRD33BA6NCL7 494 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 NME4O00746 187 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 OR8G3PP0DMU2 310 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 COX6B1P14854 86 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 RPL22L1Q6P5R6 122 aaKnown RBP12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 FBXW12Q6X9E4 464 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 ESPNLQ6ZVH7 1005 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 MRGPRX4Q96LA9 322 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 ALG12Q9BV10 488 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 MED17Q9NVC6 651 aa12.49□□□□□ -0.41
PDGFRB-201ENST00000261799 CREBL2O60519 120 aaPredicted RBP12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 LILRB5O75023 590 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 TBX10O75333 385 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 CLEC3BP05452 202 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 ID4P47928 161 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 CLPPQ16740 277 aaPredicted RBP12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 NOXA1Q86UR1 476 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 GLB1L2Q8IW92 636 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 SIMC1Q8NDZ2 872 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 TECTBQ96PL2 329 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 GCM1Q9NP62 436 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 SIDT1Q9NXL6 827 aaKnown RBP12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 NDUFAF4Q9P032 175 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 PCDHGA7Q9Y5G6 932 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 GPR45Q9Y5Y3 372 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 BET1O15155 118 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 MITFO75030 526 aaPredicted RBP12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 SEC14L2O76054 403 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 CISD2Q8N5K1 135 aaKnown RBP12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 SDSLQ96GA7 329 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 KCNJ15Q99712 375 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 PRRT1Q99946 306 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 GPR87Q9BY21 358 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 POLDIP2Q9Y2S7 368 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 ZNF281Q9Y2X9 895 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 V9GY05 133 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 CXCL13O43927 109 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 GNB1P62873 340 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 CYCSP99999 105 aaKnown RBP12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 HSF1Q00613 529 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms