RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 CCDC190Q86UF4 302 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 KDM8Q8N371 416 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 ZMYND19Q96E35 227 aaPredicted RBP17.03■□□□□ 0.32
TRIM47-201ENST00000254816 CEP19Q96LK0 163 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 ZNF649Q9BS31 505 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 PTGES2Q9H7Z7 377 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 SACM1LQ9NTJ5 587 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 ZNF346Q9UL40 294 aaKnown RBP17.03■□□□□ 0.32
TRIM47-201ENST00000254816 SSR3Q9UNL2 185 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 ASPMQ8IZT6 3477 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 A0A0G2JMM0 328 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 A0A1W2PPB8 328 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 A0A1W2PRS3 328 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 ISPDA4D126 451 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 KIR3DP1A8MWS1 328 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 FTCDNL1E5RQL4 147 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 ZNF670-ZNF695F2Z2N8 137 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 RNF13O43567 381 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 IGHA1P01876 353 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 SDHAP31040 664 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 DNASE1L1P49184 302 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 WNT4P56705 351 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 SGCBQ16585 318 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 GLYR1Q49A26 553 aaPredicted RBP17.03■□□□□ 0.32
TRIM47-201ENST00000254816 TM9SF4Q92544 642 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 DDIT4LQ96D03 193 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 TSSK2Q96PF2 358 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 UBL7Q96S82 380 aaPredicted RBP17.03■□□□□ 0.32
TRIM47-201ENST00000254816 RACGAP1Q9H0H5 632 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 C14orf119Q9NWQ9 140 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 ERVK13-1Q9NX77 482 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 GRHPRQ9UBQ7 328 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 SLC6A5Q9Y345 797 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 C12orf71A8MTZ7 269 aa17.02■□□□□ 0.32
TRIM47-201ENST00000254816 FAM171A2A8MVW0 826 aa17.02■□□□□ 0.32
TRIM47-201ENST00000254816 CDRT15L2A8MXV6 281 aa17.02■□□□□ 0.32
TRIM47-201ENST00000254816 IDH3BO43837 385 aa17.02■□□□□ 0.32
TRIM47-201ENST00000254816 IMPDH2P12268 514 aa17.02■□□□□ 0.32
TRIM47-201ENST00000254816 CSRP1P21291 193 aaKnown RBP17.02■□□□□ 0.32
TRIM47-201ENST00000254816 NOVA1P51513 510 aaKnown RBP17.02■□□□□ 0.32
TRIM47-201ENST00000254816 CARTPTQ16568 116 aa17.02■□□□□ 0.32
TRIM47-201ENST00000254816 MESTQ5EB52 335 aa17.02■□□□□ 0.32
TRIM47-201ENST00000254816 C22orf42Q6IC83 251 aa17.02■□□□□ 0.32
TRIM47-201ENST00000254816 JAZF1Q86VZ6 243 aa17.02■□□□□ 0.32
TRIM47-201ENST00000254816 DND1Q8IYX4 353 aaKnown RBP17.02■□□□□ 0.32
TRIM47-201ENST00000254816 ZFP41Q8N8Y5 198 aa17.02■□□□□ 0.32
TRIM47-201ENST00000254816 PSD4Q8NDX1 1056 aa17.02■□□□□ 0.32
TRIM47-201ENST00000254816 SDHCQ99643 169 aaPredicted RBP17.02■□□□□ 0.32
TRIM47-201ENST00000254816 ADGRL4Q9HBW9 690 aa17.02■□□□□ 0.32
TRIM47-201ENST00000254816 RPRD1BQ9NQG5 326 aaKnown RBP17.02■□□□□ 0.32
TRIM47-201ENST00000254816 TMEM129A0AVI4 362 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 SMIM30A4D0T7 59 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 FAM47E-STBD1D6RA91 191 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 OR2T1O43869 369 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 CLEC2LP0C7M8 214 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 TNFSF8P32971 234 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 HCCSP53701 268 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 RPS25P62851 125 aaKnown RBP17.01■□□□□ 0.31
TRIM47-201ENST00000254816 DCAF10Q5QP82 559 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 LYPD4Q6UWN0 246 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 ZNF227Q86WZ6 799 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 DTX1Q86Y01 620 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 OR10H4Q8NGA5 316 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 OR1J4Q8NGS1 313 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 B3GNT4Q9C0J1 378 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 IRF2BPLQ9H1B7 796 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 TXNL4BQ9NX01 149 aaKnown RBP17.01■□□□□ 0.31
TRIM47-201ENST00000254816 STMN3Q9NZ72 180 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 PLPP3O14495 311 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 TM4SF5O14894 197 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 SNPHO15079 494 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 ZNF208O43345 1280 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 CDRT1O95170 752 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 SBK2P0C263 348 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 CPEP16870 476 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 SPI1P17947 270 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 OC90Q02509 493 aaPredicted RBP17.01■□□□□ 0.31
TRIM47-201ENST00000254816 KRR1Q13601 381 aaKnown RBP17.01■□□□□ 0.31
TRIM47-201ENST00000254816 C5orf46Q6UWT4 87 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 LAX1Q8IWV1 398 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 SLC39A7Q92504 469 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 HPS1Q92902 700 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 NTNG2Q96CW9 530 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 SLC30A2Q9BRI3 323 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 SP140LQ9H930 580 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 ASCL3Q9NQ33 180 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 CRNNQ9UBG3 495 aaPredicted RBP17.01■□□□□ 0.31
TRIM47-201ENST00000254816 UGT2A1Q9Y4X1 527 aa17.01■□□□□ 0.31
TRIM47-201ENST00000254816 A0A075B6Q4 140 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 LOC110117498-PIK3R3F6TDL0 507 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 DXOO77932 396 aaKnown RBP17■□□□□ 0.31
TRIM47-201ENST00000254816 OR6A2O95222 327 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 LALBAP00709 142 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 HLA-DOBP13765 273 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 APEHP13798 732 aaKnown RBP17■□□□□ 0.31
TRIM47-201ENST00000254816 LIFP15018 202 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 ITGA3P26006 1051 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 SHC1P29353 583 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 ETV6P41212 452 aa17■□□□□ 0.31
TRIM47-201ENST00000254816 EIF2B2P49770 351 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms