RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 FAM234AQ9H0X4 552 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 CPNE5Q9HCH3 593 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 C1orf123Q9NWV4 160 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 A6NIN4 97 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 PRAMEF4O60810 478 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 APOBEC1P41238 236 aaKnown RBP8.04□□□□□ -1.12
PTCD3-201ENST00000254630 DYRK1AQ13627 763 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 SPRED1Q7Z699 444 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 OR6T1Q8NGN1 323 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 SLAMF9Q96A28 289 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 RAB3CQ96E17 227 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 NOX4Q9NPH5 578 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 RPH3ALQ9UNE2 315 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 hCG_1809904A0A1W2PP81 198 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 A0A1W2PPE2 198 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 A0A1W2PR64 198 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 A0A1W2PRV1 198 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 C2CD4DB7Z1M9 353 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 SOCS6O14544 535 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 DPM1O60762 260 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 TPPPO94811 219 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 HLA-AP01891 365 aaKnown RBP8.04□□□□□ -1.12
PTCD3-201ENST00000254630 ALPLP05186 524 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 NPPBP16860 134 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 ALDH3B1P43353 468 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF91Q05481 1191 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 ARHGAP11BQ3KRB8 267 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 CD300LGQ6UXG3 332 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 BPIFB2Q8N4F0 458 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 SUMF2Q8NBJ7 301 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 PAQR8Q8TEZ7 354 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 CCDC74BQ96LY2 380 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 SELENOIQ9C0D9 397 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 C20orf27Q9GZN8 174 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 TMEM38AQ9H6F2 299 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 ATG4BQ9Y4P1 393 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 CCDC163A0A0D9SF12 145 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 NAGAP17050 411 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 RAB6AP20340 208 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 EVI2BP34910 448 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 EPHA5P54756 1037 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 C1orf140Q5VVS0 124 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 ELP2Q6IA86 826 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 HEPHL1Q6MZM0 1159 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 Q6ZPB1 254 aaPredicted RBP8.04□□□□□ -1.12
PTCD3-201ENST00000254630 RDH10Q8IZV5 341 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 C12orf45Q8N5I9 185 aaPredicted RBP8.04□□□□□ -1.12
PTCD3-201ENST00000254630 SLC37A2Q8TED4 501 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF355PQ9NSJ1 428 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 HIF1ANQ9NWT6 349 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 TBC1D29Q9UFV1 150 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 CLDN24A6NM45 220 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 H0Y8X5 98 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 NXPH2O95156 264 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 MT-ATP6P00846 226 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 IFNA10P01566 189 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 APOC3P02656 99 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 ESCO2Q56NI9 601 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 FRMPD2BQ6IN97 320 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 TMEM71Q6P5X7 295 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 BRICD5Q6PL45 260 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 ETFBKMTQ8IXQ9 262 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 BCL7CQ8WUZ0 217 aaPredicted RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 SLC35A4Q96G79 324 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 TRIB1Q96RU8 372 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 A0A1W2PPV4 95 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 EDIL3O43854 480 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 ZIC2O95409 532 aaPredicted RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 SCG5P05408 212 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 PTAFRP25105 342 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 CLVS2Q5SYC1 327 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 RSPO2Q6UXX9 243 aaPredicted RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 TMEM59Q9BXS4 323 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 SLC19A3Q9BZV2 496 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 SIDT1Q9NXL6 827 aaKnown RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 ASIC5Q9NY37 505 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 A8MVM7 634 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 PMP2P02689 132 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 SRFP11831 508 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 TACR1P25103 407 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 CXADRP78310 365 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 DPTQ07507 201 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 RNLSQ5VYX0 342 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 PELI3Q8N2H9 469 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 BEST4Q8NFU0 473 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 EMG1Q92979 244 aaKnown RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 SGK3Q96BR1 496 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 COQ10AQ96MF6 247 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 DEFB127Q9H1M4 99 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 FER1L6Q2WGJ9 1857 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 TCRBV5S1A1TA0A578 114 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 ACOD1A6NK06 481 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 TARM1B6A8C7 271 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 PLPP1O14494 284 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 EIF4E2O60573 245 aaKnown RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 ABHD16AO95870 558 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 EIF4EP06730 217 aaKnown RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 HOXB5P09067 269 aa8.03□□□□□ -1.12
PTCD3-201ENST00000254630 TRHRP34981 398 aaPredicted RBP8.03□□□□□ -1.12
PTCD3-201ENST00000254630 MFAP5Q13361 173 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms