RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 LANCL2Q9NS86 450 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 PPT2Q9UMR5 302 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 SLC22A7Q9Y694 548 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 ARNTP27540 789 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 RRAS2P62070 204 aaPredicted RBP17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 DCXRQ7Z4W1 244 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 SYT9Q86SS6 491 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 NKAIN4Q8IVV8 208 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 OR52I1Q8NGK6 324 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 Q96M85 177 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 DEFB127Q9H1M4 99 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 PRMT8Q9NR22 394 aaPredicted RBP17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 MCRIP1C9JLW8 97 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 ALOX12BO75342 701 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 LPLP06858 475 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 RACK1P63244 317 aaKnown RBP17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 RELAQ04206 551 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 DUSP7Q16829 419 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 INPP5EQ9NRR6 644 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 LINC01565O15544 149 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 ZNF77Q15935 545 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 MFSD12Q6NUT3 480 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 CHTF18Q8WVB6 975 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 BCL7BQ9BQE9 202 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 NMNAT2Q9BZQ4 307 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 WDR76Q9H967 626 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 KIAA0100Q14667 2235 aaKnown RBP17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 TPT1P13693 172 aaKnown RBP17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 PKLRP30613 574 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 AGFG1P52594 562 aaKnown RBP17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 TMEM52BQ4KMG9 183 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 TMEM240Q5SV17 173 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 ALKAL2Q6UX46 152 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 NEURL3Q96EH8 262 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 TMEM30AQ9NV96 361 aa17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 CGGBP1Q9UFW8 167 aaPredicted RBP17.24■□□□□ 0.35
SMARCC1-201ENST00000254480 TCRBV5S1A1TA0A578 114 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 LRIT2A6NDA9 550 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 A6NHS1 94 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 RFC3P40938 356 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 TGM4P49221 684 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 FXNQ16595 210 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 RNF113BQ8IZP6 322 aaKnown RBP17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 TXNL4BQ9NX01 149 aaKnown RBP17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 NDUFAF4Q9P032 175 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 COA3Q9Y2R0 106 aaPredicted RBP17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 ZNF705FA8MVS1 300 aaPredicted RBP17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 MED6O75586 246 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 NXPH2O95156 264 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 ZNF705DP0CH99 300 aaPredicted RBP17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 ZNF705BP0CI00 300 aaPredicted RBP17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 SLC35E2P0CK97 266 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 SUMF1Q8NBK3 374 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 MFRPQ9BY79 579 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 ASB1Q9Y576 335 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 APEX1P27695 318 aaKnown RBP17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 GDNFP39905 211 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 C14orf28Q4W4Y0 310 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 ZFAND1Q8TCF1 268 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 SLC46A1Q96NT5 459 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 KNL1Q8NG31 2342 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 MRPS14O60783 128 aaKnown RBP17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 NFYBP25208 207 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 RPP30P78346 268 aaKnown RBP17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 IGLV3-10A0A075B6K4 115 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 CD63P08962 238 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 FAM219BQ5XKK7 198 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 PRSS45Q7RTY3 260 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 SCCPDHQ8NBX0 429 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 PDCD1LG2Q9BQ51 273 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 PIGQQ9BRB3 760 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 CHST8Q9H2A9 424 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 ZFP57Q9NU63 452 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 DECR2Q9NUI1 292 aa17.23■□□□□ 0.35
SMARCC1-201ENST00000254480 MYO7AQ13402 2215 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 ANKRD33BA6NCL7 494 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 B4GALT3O60512 393 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 DNAJB6O75190 326 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 GLSO94925 669 aaPredicted RBP17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 IL1AP01583 271 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 GABREP78334 506 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 LAMB4A4D0S4 1761 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 OR2W5A6NFC9 320 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 HSD17B6O14756 317 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 CTNSO60931 367 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 CD27P26842 260 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 PRTGQ2VWP7 1150 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 TMEM217Q8N7C4 229 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 SUMF2Q8NBJ7 301 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 IFI44Q8TCB0 444 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 UBTD2Q8WUN7 234 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 PSORS1C1Q9UIG5 152 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 TMEM212A6NML5 194 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 SLC34A2O95436 690 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 HOXA1P49639 335 aaPredicted RBP17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 CCR6P51684 374 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 METRNLQ641Q3 311 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 SFXN4Q6P4A7 337 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 OR6V1Q8N148 313 aa17.22■□□□□ 0.35
SMARCC1-201ENST00000254480 TMEM102Q8N9M5 508 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms