RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 SHEQ5VZ18 495 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 CARD17Q5XLA6 110 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 KLHL24Q6TFL4 600 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 SLC46A3Q7Z3Q1 461 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 GPR137CQ8N3F9 429 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 PIK3C3Q8NEB9 887 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 TMEM255BQ8WV15 326 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 GSX2Q9BZM3 304 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 POLR2J2Q9GZM3 115 aaKnown RBP20.07■□□□□ 0.8
LSM4-201ENST00000252816 POLR2J3Q9H1A7 115 aaKnown RBP20.07■□□□□ 0.8
LSM4-201ENST00000252816 DLL4Q9NR61 685 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 ZNF701Q9NV72 531 aaPredicted RBP20.07■□□□□ 0.8
LSM4-201ENST00000252816 TAS2R5Q9NYW4 299 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 CISD1Q9NZ45 108 aaKnown RBP20.07■□□□□ 0.8
LSM4-201ENST00000252816 ARHGEF9O43307 516 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 SERPINI2O75830 405 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 ASAH2BP0C7U1 165 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 PAX1P15863 534 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 FUT4P22083 530 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 ARF1P84077 181 aaKnown RBP20.06■□□□□ 0.8
LSM4-201ENST00000252816 C1QTNF12Q5T7M4 302 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 ANKRD16Q6P6B7 361 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 PIGWQ7Z7B1 504 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 C20orf196Q8IYI0 205 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 ANKK1Q8NFD2 765 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 PFN4Q8NHR9 129 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 RADILQ96JH8 1075 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 CXorf56Q9H5V9 222 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 CRLF2Q9HC73 371 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 ZNF229Q9UJW7 825 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 A4GNTQ9UNA3 340 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 MGAT4BQ9UQ53 548 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 MAGED1Q9Y5V3 778 aaPredicted RBP20.06■□□□□ 0.8
LSM4-201ENST00000252816 SNX13Q9Y5W8 968 aa20.06■□□□□ 0.8
LSM4-201ENST00000252816 M0R3G1 203 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 OVOL3O00110 214 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 GSTA4O15217 222 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 OR6A2O95222 327 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 WNT11O96014 354 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 MT-ND1P03886 318 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 RBM34P42696 430 aaKnown RBP20.05■□□□□ 0.8
LSM4-201ENST00000252816 SH3BGRP55822 239 aaPredicted RBP20.05■□□□□ 0.8
LSM4-201ENST00000252816 TUBA1BP68363 451 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 TUBA4AP68366 448 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 ZP4Q12836 540 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 CAMK2DQ13557 499 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 CEACAM16Q2WEN9 425 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 SLC22A25Q6T423 547 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 B3GLCTQ6Y288 498 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 TUBA1AQ71U36 451 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 MAGEE2Q8TD90 523 aaPredicted RBP20.05■□□□□ 0.8
LSM4-201ENST00000252816 LZICQ8WZA0 190 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 KCTD14Q9BQ13 255 aaPredicted RBP20.05■□□□□ 0.8
LSM4-201ENST00000252816 OBP2BQ9NPH6 170 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 C20orf141Q9NUB4 165 aa20.05■□□□□ 0.8
LSM4-201ENST00000252816 E7EQL1 145 aa20.04■□□□□ 0.8
LSM4-201ENST00000252816 TMCC2O75069 709 aa20.04■□□□□ 0.8
LSM4-201ENST00000252816 CD8AP01732 235 aa20.04■□□□□ 0.8
LSM4-201ENST00000252816 IFNGR1P15260 489 aa20.04■□□□□ 0.8
LSM4-201ENST00000252816 NCK1P16333 377 aa20.04■□□□□ 0.8
LSM4-201ENST00000252816 RPS4XP62701 263 aaKnown RBP20.04■□□□□ 0.8
LSM4-201ENST00000252816 CBLL1Q75N03 491 aa20.04■□□□□ 0.8
LSM4-201ENST00000252816 TMEM239Q8WW34 195 aa20.04■□□□□ 0.8
LSM4-201ENST00000252816 LRR1Q96L50 414 aa20.04■□□□□ 0.8
LSM4-201ENST00000252816 ARL2BPQ9Y2Y0 163 aa20.04■□□□□ 0.8
LSM4-201ENST00000252816 ARPC4-TTLL3A0A0A6YYG9 625 aa20.03■□□□□ 0.8
LSM4-201ENST00000252816 ZNF726A6NNF4 738 aa20.03■□□□□ 0.8
LSM4-201ENST00000252816 NDUFAB1O14561 156 aa20.03■□□□□ 0.8
LSM4-201ENST00000252816 ZNF682O95780 498 aa20.03■□□□□ 0.8
LSM4-201ENST00000252816 SERPINA1P01009 418 aa20.03■□□□□ 0.8
LSM4-201ENST00000252816 HIST1H2ABP04908 130 aa20.03■□□□□ 0.8
LSM4-201ENST00000252816 THRBP10828 461 aa20.03■□□□□ 0.8
LSM4-201ENST00000252816 UMPSP11172 480 aa20.03■□□□□ 0.8
LSM4-201ENST00000252816 YAP1P46937 504 aaKnown RBP20.03■□□□□ 0.8
LSM4-201ENST00000252816 BIDP55957 195 aa20.03■□□□□ 0.8
LSM4-201ENST00000252816 UBE2NP61088 152 aaKnown RBP20.03■□□□□ 0.8
LSM4-201ENST00000252816 PRSS57Q6UWY2 283 aa20.03■□□□□ 0.8
LSM4-201ENST00000252816 HIST3H2AQ7L7L0 130 aa20.03■□□□□ 0.8
LSM4-201ENST00000252816 YTHDF3Q7Z739 585 aaKnown RBP20.03■□□□□ 0.8
LSM4-201ENST00000252816 HIST1H2ACQ93077 130 aa20.03■□□□□ 0.8
LSM4-201ENST00000252816 PRRC1Q96M27 445 aa20.03■□□□□ 0.8
LSM4-201ENST00000252816 POU2F3Q9UKI9 436 aa20.03■□□□□ 0.8
LSM4-201ENST00000252816 IGHV1-18A0A0C4DH31 117 aa20.02■□□□□ 0.8
LSM4-201ENST00000252816 J3KTA2 159 aa20.02■□□□□ 0.8
LSM4-201ENST00000252816 DYNC1I1O14576 645 aa20.02■□□□□ 0.8
LSM4-201ENST00000252816 RNF13O43567 381 aa20.02■□□□□ 0.8
LSM4-201ENST00000252816 SEC14L2O76054 403 aa20.02■□□□□ 0.8
LSM4-201ENST00000252816 OR7A10O76100 309 aa20.02■□□□□ 0.8
LSM4-201ENST00000252816 ATP5J2P56134 94 aa20.02■□□□□ 0.8
LSM4-201ENST00000252816 LSM11P83369 360 aaKnown RBP eCLIP20.02■□□□□ 0.8
LSM4-201ENST00000252816 SLC35D2Q76EJ3 337 aa20.02■□□□□ 0.8
LSM4-201ENST00000252816 DTX2Q86UW9 622 aa20.02■□□□□ 0.8
LSM4-201ENST00000252816 GEMIN6Q8WXD5 167 aaKnown RBP20.02■□□□□ 0.8
LSM4-201ENST00000252816 SGTBQ96EQ0 304 aa20.02■□□□□ 0.8
LSM4-201ENST00000252816 HSH2DQ96JZ2 352 aa20.02■□□□□ 0.8
LSM4-201ENST00000252816 HS6ST2Q96MM7 605 aa20.02■□□□□ 0.8
LSM4-201ENST00000252816 TRAF4Q9BUZ4 470 aaPredicted RBP20.02■□□□□ 0.8
LSM4-201ENST00000252816 SPAG4Q9NPE6 437 aa20.02■□□□□ 0.8
LSM4-201ENST00000252816 ARL8BQ9NVJ2 186 aa20.02■□□□□ 0.8
LSM4-201ENST00000252816 HEATR1Q9H583 2144 aaKnown RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms