RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 RPL22L1Q6P5R6 122 aaKnown RBP10.95□□□□□ -0.66
USHBP1-201ENST00000252597 KCTD20Q7Z5Y7 419 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 MUC20Q8N307 709 aaPredicted RBP10.95□□□□□ -0.66
USHBP1-201ENST00000252597 OR2T27Q8NH04 317 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 OR1E3Q8WZA6 343 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 ATOH1Q92858 354 aaPredicted RBP10.95□□□□□ -0.66
USHBP1-201ENST00000252597 SLC25A38Q96DW6 304 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 UBL7Q96S82 380 aaPredicted RBP10.95□□□□□ -0.66
USHBP1-201ENST00000252597 APOOQ9BUR5 198 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 SLC22A13Q9Y226 551 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 DTX4Q9Y2E6 619 aa10.95□□□□□ -0.66
USHBP1-201ENST00000252597 TDRD6O60522 2096 aaKnown RBP10.95□□□□□ -0.66
USHBP1-201ENST00000252597 MCRIP1C9JLW8 97 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 SUSD5O60279 629 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 TBX19O60806 448 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 AGR2O95994 175 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 ZNF10P21506 573 aaPredicted RBP10.94□□□□□ -0.66
USHBP1-201ENST00000252597 GJA4P35212 333 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 LUMP51884 338 aaPredicted RBP10.94□□□□□ -0.66
USHBP1-201ENST00000252597 PSMD4P55036 377 aaKnown RBP10.94□□□□□ -0.66
USHBP1-201ENST00000252597 PPP2CBP62714 309 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 PPP2CAP67775 309 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 RHOUQ7L0Q8 258 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 ZNF765Q7L2R6 523 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 MRGPREQ86SM8 312 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 BEST3Q8N1M1 668 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 CSNK1A1LQ8N752 337 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 TMEM185AQ8NFB2 350 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 OR10K1Q8NGX5 313 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 OR2M4Q96R27 311 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 NRSN2Q9GZP1 204 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 WDR76Q9H967 626 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 OR2S2Q9NQN1 319 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 SLC39A1Q9NY26 324 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 COMMD9Q9P000 198 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 MOKQ9UQ07 419 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 ERVK-19Q9WJR5 959 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 KLHDC2Q9Y2U9 406 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 PRR32B1ATL7 298 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 GABARAPH6UMI1 98 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 APBB3O95704 486 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 FAUP35544 74 aaKnown RBP10.94□□□□□ -0.66
USHBP1-201ENST00000252597 IGFALSP35858 605 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 GPR18Q14330 331 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 ZIC1Q15915 447 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 TMEM52BQ4KMG9 183 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 OR7E24Q6IFN5 339 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 STAC2Q6ZMT1 411 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 ABHD13Q7L211 337 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 ZNF546Q86UE3 836 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 OOSP2Q86WS3 158 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 COMMD2Q86X83 199 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 STK35Q8TDR2 534 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 RAB11FIP5Q9BXF6 653 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 TMEM231Q9H6L2 316 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 TRPV4Q9HBA0 871 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 IL23AQ9NPF7 189 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 CENPMQ9NSP4 180 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 DENND4CQ5VZ89 1909 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 ACOT7O00154 380 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 DCTN6O00399 190 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 KLF4O43474 513 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 HCRTR1O43613 425 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 ECDO95905 644 aaPredicted RBP10.94□□□□□ -0.66
USHBP1-201ENST00000252597 HIST1H2ABP04908 130 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 VSIG10L2P0DP72 767 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 ICAM2P13598 275 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 H2BFSP57053 126 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 BTG2P78543 158 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 SPOCK1Q08629 439 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 GK2Q14410 553 aaPredicted RBP10.94□□□□□ -0.66
USHBP1-201ENST00000252597 GFOD2Q3B7J2 385 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 ARMC6Q6NXE6 501 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 FAM199XQ6PEV8 388 aaPredicted RBP10.94□□□□□ -0.66
USHBP1-201ENST00000252597 SEZ6L2Q6UXD5 910 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 HIST3H2AQ7L7L0 130 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 NR4A3Q92570 626 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 HIST1H2ACQ93077 130 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 ANKRD19PQ9H560 264 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 GRHPRQ9UBQ7 328 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 ZNF223Q9UK11 482 aaPredicted RBP10.94□□□□□ -0.66
USHBP1-201ENST00000252597 HRH3Q9Y5N1 445 aa10.94□□□□□ -0.66
USHBP1-201ENST00000252597 F5H0A9 414 aaPredicted RBP10.93□□□□□ -0.66
USHBP1-201ENST00000252597 SDC3O75056 442 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 GPR75O95800 540 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 NMBP08949 121 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 UGT2B7P16662 529 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 MAOAP21397 527 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 MAP3K8P41279 467 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 DLX5P56178 289 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 RPS15AP62244 130 aaKnown RBP10.93□□□□□ -0.66
USHBP1-201ENST00000252597 ITPRIPL2Q3MIP1 535 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 FAM69AQ5T7M9 428 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 LRFN4Q6PJG9 635 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 TSSK4Q6SA08 328 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 TMEM205Q6UW68 189 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 SLC51BQ86UW2 128 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 DEFB119Q8N690 84 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 CAMKVQ8NCB2 501 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 TOR1AIP2Q8NFQ8 470 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms