RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 MISP3Q96FF7 219 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 ZNF354BQ96LW1 612 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 TEFMQ96QE5 360 aaKnown RBP18.19■□□□□ 0.5
HOXC13-201ENST00000243056 ZDHHC5Q9C0B5 715 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 EPHX3Q9H6B9 360 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 XKR8Q9H6D3 395 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 UQCC1Q9NVA1 299 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 ASF1AQ9Y294 204 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 HEXBP07686 556 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 ANXA5P08758 320 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 AHRP35869 848 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 ARL9Q6T311 187 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 MUC20Q8N307 709 aaPredicted RBP18.18■□□□□ 0.5
HOXC13-201ENST00000243056 BBS1Q8NFJ9 593 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 OR5D16Q8NGK9 328 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 TEAD3Q99594 435 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 OR52A5Q9H2C5 316 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 SMCO4Q9NRQ5 59 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 KANTRA0A1W2PQU2 76 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 TRAPPC13A5PLN9 417 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 OR14I1A6ND48 311 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 AP4M1O00189 453 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 SYT5O00445 386 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 SERPIND1P05546 499 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 MPC1LP0DKB6 136 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 EPXP11678 715 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 AVPR2P30518 371 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 DCTDP32321 178 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 RNF144AP50876 292 aaPredicted RBP18.18■□□□□ 0.5
HOXC13-201ENST00000243056 CXADRP78310 365 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 RAE1P78406 368 aaKnown RBP18.18■□□□□ 0.5
HOXC13-201ENST00000243056 COL9A2Q14055 689 aaPredicted RBP18.18■□□□□ 0.5
HOXC13-201ENST00000243056 BAIAP2L2Q6UXY1 529 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 ZNF813Q6ZN06 617 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 SSX6Q7RTT6 188 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 IQCHQ86VS3 1027 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 KCNRGQ8N5I3 272 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 ZNF614Q8N883 585 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 MOGAT1Q96PD6 335 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 SGK2Q9HBY8 427 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 KLHL42Q9P2K6 505 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 SLC17A4Q9Y2C5 497 aa18.18■□□□□ 0.5
HOXC13-201ENST00000243056 PRSS38A1L453 326 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 BCL2L11O43521 198 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 C1orf105O95561 183 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 C8GP07360 202 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 SAGP10523 405 aaPredicted RBP18.17■□□□□ 0.5
HOXC13-201ENST00000243056 STAT5AP42229 794 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 AKR1C3P42330 323 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 PIN1Q13526 163 aaPredicted RBP18.17■□□□□ 0.5
HOXC13-201ENST00000243056 NAE1Q13564 534 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 DDX39BQ13838 428 aaKnown RBP18.17■□□□□ 0.5
HOXC13-201ENST00000243056 DPPA2Q7Z7J5 298 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 LRRTM1Q86UE6 522 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 CMTM4Q8IZR5 234 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 SIRT6Q8N6T7 355 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 DNAAF1Q8NEP3 725 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 LINC00615Q96LM1 132 aaPredicted RBP18.17■□□□□ 0.5
HOXC13-201ENST00000243056 LAT2Q9GZY6 243 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 MEPEQ9NQ76 525 aaPredicted RBP18.17■□□□□ 0.5
HOXC13-201ENST00000243056 ZNF230Q9UIE0 474 aaPredicted RBP18.17■□□□□ 0.5
HOXC13-201ENST00000243056 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.17■□□□□ 0.5
HOXC13-201ENST00000243056 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 A0A0D9SG52 128 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 BTBD17A6NE02 478 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 ZNF705EA8MWA4 302 aaPredicted RBP18.17■□□□□ 0.5
HOXC13-201ENST00000243056 NPIPB9F8W1W9 429 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 ATP1B1P05026 303 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 PTHLHP12272 177 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 TSPAN7P41732 249 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 TMEFF1Q8IYR6 380 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 OR5J2Q8NH18 312 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 SLC39A7Q92504 469 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 PHYHIPLQ96FC7 376 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 ZNF514Q96K75 400 aaPredicted RBP18.17■□□□□ 0.5
HOXC13-201ENST00000243056 TIMP4Q99727 224 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 C2orf88Q9BSF0 95 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 TSPAN10Q9H1Z9 355 aaPredicted RBP18.17■□□□□ 0.5
HOXC13-201ENST00000243056 CHRDQ9H2X0 955 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 EXOGQ9Y2C4 368 aaKnown RBP18.17■□□□□ 0.5
HOXC13-201ENST00000243056 FAM96BQ9Y3D0 163 aa18.17■□□□□ 0.5
HOXC13-201ENST00000243056 CH25HO95992 272 aa18.16■□□□□ 0.5
HOXC13-201ENST00000243056 IFNGP01579 166 aa18.16■□□□□ 0.5
HOXC13-201ENST00000243056 CELA2BP08218 269 aaPredicted RBP18.16■□□□□ 0.5
HOXC13-201ENST00000243056 GKN3PP0CG01 181 aa18.16■□□□□ 0.5
HOXC13-201ENST00000243056 BCKDHBP21953 392 aa18.16■□□□□ 0.5
HOXC13-201ENST00000243056 HGFACQ04756 655 aa18.16■□□□□ 0.5
HOXC13-201ENST00000243056 GFOD2Q3B7J2 385 aa18.16■□□□□ 0.5
HOXC13-201ENST00000243056 METRNLQ641Q3 311 aa18.16■□□□□ 0.5
HOXC13-201ENST00000243056 KIAA0895LQ68EN5 471 aa18.16■□□□□ 0.5
HOXC13-201ENST00000243056 CD300LDQ6UXZ3 194 aa18.16■□□□□ 0.5
HOXC13-201ENST00000243056 CCDC54Q8NEL0 328 aa18.16■□□□□ 0.5
HOXC13-201ENST00000243056 OR4K5Q8NGD3 323 aa18.16■□□□□ 0.5
HOXC13-201ENST00000243056 LGALS14Q8TCE9 139 aa18.16■□□□□ 0.5
HOXC13-201ENST00000243056 PAQR8Q8TEZ7 354 aa18.16■□□□□ 0.5
HOXC13-201ENST00000243056 TFGQ92734 400 aaPredicted RBP18.16■□□□□ 0.5
HOXC13-201ENST00000243056 FCRL4Q96PJ5 515 aa18.16■□□□□ 0.5
HOXC13-201ENST00000243056 MTERF1Q99551 399 aaKnown RBP18.16■□□□□ 0.5
HOXC13-201ENST00000243056 STOX2Q9P2F5 926 aaPredicted RBP18.16■□□□□ 0.5
HOXC13-201ENST00000243056 SH2B3Q9UQQ2 575 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms