RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 IRGMA1A4Y4 181 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 AQP7P3A6NL99 342 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 PLPP3O14495 311 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 AGFG1P52594 562 aaKnown RBP9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 WDR88Q6ZMY6 472 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 ADCK1Q86TW2 530 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 ABHD3Q8WU67 409 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 WNT2BQ93097 391 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 CCNB1IP1Q9NPC3 277 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 USE1Q9NZ43 259 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZNF346Q9UL40 294 aaKnown RBP9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 BGLAPP02818 100 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 ALPLP05186 524 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 OPRM1P35372 400 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 RANBP1P43487 201 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 PLBD1Q6P4A8 553 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 FAM220AQ7Z4H9 259 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 GID4Q8IVV7 300 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 ALDH16A1Q8IZ83 802 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 ZNF540Q8NDQ6 660 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 OR9Q1Q8NGQ5 310 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 NTN4Q9HB63 628 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 FAM118AQ9NWS6 357 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 IKZF2Q9UKS7 526 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 GPR52Q9Y2T5 361 aa9.96□□□□□ -0.81
TNFAIP3-201ENST00000237289 A0A1B0GUH1 482 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 ZNHIT1O43257 154 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 MST1P26927 711 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 PCYT1AP49585 367 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 GLO1Q04760 184 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 IL18R1Q13478 541 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 ZNF239Q16600 458 aaKnown RBP9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 MEDAGQ5VYS4 303 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 LUZP2Q86TE4 346 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 ARIH2OSQ8N7S6 290 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 MUCL1Q96DR8 90 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 BARD1Q99728 777 aaKnown RBP9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 SIGLEC7Q9Y286 467 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 RPL36Q9Y3U8 105 aaKnown RBP9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 DNAJC13O75165 2243 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 hCG_2014768A0A024R1R8 64 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 PFDN1O60925 122 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 SEMG1P04279 462 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 IMPDH2P12268 514 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 CPN1P15169 458 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 PAX7P23759 505 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 SHC1P29353 583 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 LHX2P50458 406 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 SUCLG1P53597 346 aaKnown RBP9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 FAPQ12884 760 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 KDM4DQ6B0I6 523 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 TUSC5Q8IXB3 177 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 PARP8Q8N3A8 854 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 OR4C15Q8NGM1 316 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 WDYHV1Q96HA8 205 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 GMPPAQ96IJ6 420 aaPredicted RBP9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 TSC22D3Q99576 134 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 MAN2C1Q9NTJ4 1040 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 SPRR3Q9UBC9 169 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 ADAM18Q9Y3Q7 739 aa9.96□□□□□ -0.82
TNFAIP3-201ENST00000237289 ADAMTS20P59510 1910 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 H7C1C5 153 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 FADS2O95864 444 aaKnown RBP9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 IGHG3P01860 377 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 OCM2P0CE71 109 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 OCMP0CE72 109 aaPredicted RBP9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 SDHAP31040 664 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 LCN6P62502 163 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 TLE1Q04724 770 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 PRR30Q53SZ7 412 aaPredicted RBP9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 CPOQ8IVL8 374 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 ZPLD1Q8TCW7 415 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 RASD2Q96D21 266 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 LRR1Q96L50 414 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 CENPMQ9NSP4 180 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 DNAJC27Q9NZQ0 273 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 TINAGQ9UJW2 476 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 H0YAE9 185 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 AGFG2O95081 481 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 GRK5P34947 590 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 EMC4Q5J8M3 183 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 ASB5Q8WWX0 329 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 NMNAT3Q96T66 252 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 NUP210LQ5VU65 1888 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 CLDN18P56856 261 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 OR10H4Q8NGA5 316 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 OR51L1Q8NGJ5 315 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 OR6N2Q8NGY6 317 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 TRUB1Q8WWH5 349 aaKnown RBP9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 MYDGFQ969H8 173 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 SLC25A44Q96H78 314 aaPredicted RBP9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 GABARAPL1Q9H0R8 117 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 SYT4Q9H2B2 425 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 AMBNQ9NP70 447 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 HIF3AQ9Y2N7 669 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 LAMA1P25391 3075 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 DOCK10Q96BY6 2186 aa9.95□□□□□ -0.82
TNFAIP3-201ENST00000237289 FAM171A2A8MVW0 826 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms