RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 A0A1W2PS29 197 aa18.77■□□□□ 0.6
SNX3-201ENST00000230085 MCRIP1C9JLW8 97 aa18.77■□□□□ 0.6
SNX3-201ENST00000230085 NUDT21O43809 227 aaKnown RBP18.77■□□□□ 0.6
SNX3-201ENST00000230085 DPP4P27487 766 aa18.77■□□□□ 0.6
SNX3-201ENST00000230085 SLC6A6P31641 620 aa18.77■□□□□ 0.6
SNX3-201ENST00000230085 ACVR1BP36896 505 aa18.77■□□□□ 0.6
SNX3-201ENST00000230085 CRMP1Q14194 572 aa18.77■□□□□ 0.6
SNX3-201ENST00000230085 TRIP6Q15654 476 aaKnown RBP18.77■□□□□ 0.6
SNX3-201ENST00000230085 ISXQ2M1V0 245 aa18.77■□□□□ 0.6
SNX3-201ENST00000230085 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.77■□□□□ 0.6
SNX3-201ENST00000230085 Q6ZTK2 550 aa18.77■□□□□ 0.6
SNX3-201ENST00000230085 HSD17B13Q7Z5P4 300 aaPredicted RBP18.77■□□□□ 0.6
SNX3-201ENST00000230085 BEST4Q8NFU0 473 aa18.77■□□□□ 0.6
SNX3-201ENST00000230085 OR2L3Q8NG85 312 aa18.77■□□□□ 0.6
SNX3-201ENST00000230085 NT5CQ8TCD5 201 aa18.77■□□□□ 0.6
SNX3-201ENST00000230085 SCARB1Q8WTV0 552 aa18.77■□□□□ 0.6
SNX3-201ENST00000230085 ZNF559Q9BR84 538 aa18.77■□□□□ 0.6
SNX3-201ENST00000230085 C19orf53Q9UNZ5 99 aaPredicted RBP18.77■□□□□ 0.6
SNX3-201ENST00000230085 A0A087WV62 115 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 ARPC4-TTLL3A0A0A6YYG9 625 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 RHPN2P1A8MT19 583 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 TNFSF14O43557 240 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 GMDSO60547 372 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 PPM1BO75688 479 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 NMBP08949 121 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 C8orf89P0DMQ9 161 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 CXCL2P19875 107 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 NFYAP23511 347 aaPredicted RBP18.76■□□□□ 0.59
SNX3-201ENST00000230085 IL32P24001 234 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 NOS3P29474 1203 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 TNFRSF17Q02223 184 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 FHL5Q5TD97 284 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 TMEM81Q6P7N7 255 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 USP53Q70EK8 1073 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 DTX3Q8N9I9 347 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 PFN4Q8NHR9 129 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 THEM6Q8WUY1 208 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 SLC25A38Q96DW6 304 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 LDAHQ9H6V9 325 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 AUNIPQ9H7T9 357 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 POT1Q9NUX5 634 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 ETV7Q9Y603 341 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 NUP210LQ5VU65 1888 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 IFITM5A6NNB3 132 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 SERPINI2O75830 405 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 NDUFB6O95139 128 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 FGF2P09038 288 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 ACP1P24666 158 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 PTGER1P34995 402 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 NUP62P37198 522 aaPredicted RBP18.76■□□□□ 0.59
SNX3-201ENST00000230085 MAP3K8P41279 467 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 GPR18Q14330 331 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 DUSP5Q16690 384 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 IFI44Q8TCB0 444 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 CCDC74AQ96AQ1 378 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 ANKRD10Q9NXR5 420 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 RCE1Q9Y256 329 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 HEBP2Q9Y5Z4 205 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 COLEC10Q9Y6Z7 277 aa18.76■□□□□ 0.59
SNX3-201ENST00000230085 UNC13CQ8NB66 2214 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 L7N2F9 121 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 CREBL2O60519 120 aaPredicted RBP18.75■□□□□ 0.59
SNX3-201ENST00000230085 CSRP1P21291 193 aaKnown RBP18.75■□□□□ 0.59
SNX3-201ENST00000230085 CFPP27918 469 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 CD96P40200 585 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 PTH2RP49190 550 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 VEGFCP49767 419 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 DUSP3P51452 185 aaPredicted RBP18.75■□□□□ 0.59
SNX3-201ENST00000230085 MAP2K6P52564 334 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 FHL1Q13642 323 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 LTB4RQ15722 352 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 SLC35D3Q5M8T2 416 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 RPTNQ6XPR3 784 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 SSX6Q7RTT6 188 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 OR13C2Q8NGS9 318 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 OR14A16Q8NHC5 309 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 FCAMRQ8WWV6 532 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 HOXB13Q92826 284 aaPredicted RBP18.75■□□□□ 0.59
SNX3-201ENST00000230085 RBM18Q96H35 190 aaKnown RBP18.75■□□□□ 0.59
SNX3-201ENST00000230085 PEX11GQ96HA9 241 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 CNN2Q99439 309 aaKnown RBP18.75■□□□□ 0.59
SNX3-201ENST00000230085 OR51V1Q9H2C8 321 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 OR6C2Q9NZP2 312 aa18.75■□□□□ 0.59
SNX3-201ENST00000230085 ACOT7O00154 380 aa18.74■□□□□ 0.59
SNX3-201ENST00000230085 AQP8O94778 261 aa18.74■□□□□ 0.59
SNX3-201ENST00000230085 DRD5P21918 477 aa18.74■□□□□ 0.59
SNX3-201ENST00000230085 MPPED2Q15777 294 aa18.74■□□□□ 0.59
SNX3-201ENST00000230085 CCDC157Q569K6 752 aa18.74■□□□□ 0.59
SNX3-201ENST00000230085 MRPL2Q5T653 305 aaKnown RBP18.74■□□□□ 0.59
SNX3-201ENST00000230085 ARSKQ6UWY0 536 aa18.74■□□□□ 0.59
SNX3-201ENST00000230085 ZNF671Q8TAW3 534 aa18.74■□□□□ 0.59
SNX3-201ENST00000230085 NAT6Q93015 286 aa18.74■□□□□ 0.59
SNX3-201ENST00000230085 SLC38A3Q99624 504 aa18.74■□□□□ 0.59
SNX3-201ENST00000230085 TWSG1Q9GZX9 223 aa18.74■□□□□ 0.59
SNX3-201ENST00000230085 KIR3DX1Q9H7L2 352 aa18.74■□□□□ 0.59
SNX3-201ENST00000230085 MEPEQ9NQ76 525 aaPredicted RBP18.74■□□□□ 0.59
SNX3-201ENST00000230085 CHRNA9Q9UGM1 479 aa18.74■□□□□ 0.59
SNX3-201ENST00000230085 MRPS7Q9Y2R9 242 aaKnown RBP18.74■□□□□ 0.59
SNX3-201ENST00000230085 A0A0B4J2E0 115 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 SPAARA0A1B0GVQ0 90 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms