RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 TRILQ7L0X0 811 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 VASH1Q7L8A9 365 aaPredicted RBP9.65□□□□□ -0.86
CDCA3-201ENST00000229265 FAM122BQ7Z309 247 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 ADGRG3Q86Y34 549 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 FAM98AQ8NCA5 519 aaKnown RBP9.65□□□□□ -0.86
CDCA3-201ENST00000229265 OR4F15Q8NGB8 312 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 OR2Y1Q8NGV0 311 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 OR2T4Q8NH00 348 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 SMPDL3BQ92485 455 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 THRSPQ92748 146 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 KCTD12Q96CX2 325 aaKnown RBP9.65□□□□□ -0.86
CDCA3-201ENST00000229265 COX4I2Q96KJ9 171 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 MRGPRX4Q96LA9 322 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 IMMP1LQ96LU5 166 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 CCDC32Q9BV29 185 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 ALG8Q9BVK2 526 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 DEFB126Q9BYW3 111 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 ADGRL4Q9HBW9 690 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 SERINC1Q9NRX5 453 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 MRPL39Q9NYK5 338 aaKnown RBP9.65□□□□□ -0.86
CDCA3-201ENST00000229265 RABL2AQ9UBK7 228 aaPredicted RBP9.65□□□□□ -0.86
CDCA3-201ENST00000229265 RABL2BQ9UNT1 228 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 YARS2Q9Y2Z4 477 aaKnown RBP9.65□□□□□ -0.86
CDCA3-201ENST00000229265 TMED7Q9Y3B3 224 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 FLNCQ14315 2725 aa9.65□□□□□ -0.86
CDCA3-201ENST00000229265 LOC102725191A0A1B0GVB3 256 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 ANKRD33BA6NCL7 494 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 TMEM200CA6NKL6 621 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 MCIDASD6RGH6 385 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 BLOC1S5-TXNDC5H3BN57 136 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 NTN1O95631 604 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 RENP00797 406 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 IGHMP01871 453 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 ATXN8OSP0DMR3 200 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 CELP19835 753 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 TGM4P49221 684 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 MTNR1BP49286 362 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 GBX2P52951 348 aaPredicted RBP9.64□□□□□ -0.87
CDCA3-201ENST00000229265 CTXN1P60606 82 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 RPS7P62081 194 aaKnown RBP9.64□□□□□ -0.87
CDCA3-201ENST00000229265 LTBQ06643 244 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 SRSF1Q07955 248 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDCA3-201ENST00000229265 SSPNQ14714 243 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 QPRTQ15274 297 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 GLYR1Q49A26 553 aaPredicted RBP9.64□□□□□ -0.87
CDCA3-201ENST00000229265 CDONQ4KMG0 1287 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 OR2G6Q5TZ20 316 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 MZT2AQ6P582 158 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 LANCL3Q6ZV70 420 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 NDUFAF7Q7L592 441 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 SLC16A9Q7RTY1 509 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 CCDC190Q86UF4 302 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 JAZF1Q86VZ6 243 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 MEX3DQ86XN8 651 aaKnown RBP9.64□□□□□ -0.87
CDCA3-201ENST00000229265 MFSD4AQ8N468 514 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 ARIH2OSQ8N7S6 290 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 ATP6V1C2Q8NEY4 427 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 OR5J2Q8NH18 312 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 SPRYD4Q8WW59 207 aaPredicted RBP9.64□□□□□ -0.87
CDCA3-201ENST00000229265 TAAR8Q969N4 342 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 KIAA1143Q96AT1 154 aaPredicted RBP9.64□□□□□ -0.87
CDCA3-201ENST00000229265 NTNG2Q96CW9 530 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 DDIT4LQ96D03 193 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 LMF1Q96S06 567 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 CNN2Q99439 309 aaKnown RBP9.64□□□□□ -0.87
CDCA3-201ENST00000229265 MROQ9BYG7 248 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 OR51V1Q9H2C8 321 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 ZCCHC4Q9H5U6 513 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 MARCH7Q9H992 704 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 EXOSC4Q9NPD3 245 aaKnown RBP9.64□□□□□ -0.87
CDCA3-201ENST00000229265 TAS2R16Q9NYV7 291 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 PADI1Q9ULC6 663 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 FKBP7Q9Y680 259 aa9.64□□□□□ -0.87
CDCA3-201ENST00000229265 SEC16AO15027 2179 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 A6NIZ1 184 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 FAM183AA6NL82 134 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 ADAM10O14672 748 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 RNF13O43567 381 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 OR6A2O95222 327 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 AHSA1O95433 338 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 NUDT14O95848 222 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 SPI1P17947 270 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 MST1P26927 711 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 SOX3P41225 446 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 CCR4P51679 360 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 RAP1BP61224 184 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 RAP1AP62834 184 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 SIRPAP78324 504 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 CDC20Q12834 499 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 ZNF239Q16600 458 aaKnown RBP9.63□□□□□ -0.87
CDCA3-201ENST00000229265 DEFB109BQ30KR1 87 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 ZNF791Q3KP31 576 aaPredicted RBP9.63□□□□□ -0.87
CDCA3-201ENST00000229265 C1orf140Q5VVS0 124 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 DMKNQ6E0U4 476 aaPredicted RBP9.63□□□□□ -0.87
CDCA3-201ENST00000229265 PAQR6Q6TCH4 344 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 LYPD8Q6UX82 237 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 NANOGNBQ7Z5D8 188 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 IGFN1Q86VF2 1251 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 PRSS58Q8IYP2 241 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 IL22RA1Q8N6P7 574 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms