RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ICKQ9UPZ9 632 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 LTBP4Q8N2S1 1624 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 LANCL1O43813 399 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 ZNF254O75437 659 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 RAB40ALP0C0E4 278 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 TMEM225BP0DP42 221 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 BTG1P62324 171 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 GLO1Q04760 184 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 CBFBQ13951 182 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 BCL2A1Q16548 175 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 SGCBQ16585 318 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 EEF1A1P5Q5VTE0 462 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 PRSS41Q7RTY9 318 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 RAB40AQ8WXH6 277 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 MAFIPQ8WZ33 124 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 DAZLQ92904 295 aaKnown RBP12.64□□□□□ -0.39
NFKB1-201ENST00000226574 TIMM29Q9BSF4 260 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 REV1Q9UBZ9 1251 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 SERGEFQ9UGK8 458 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 GPN3Q9UHW5 284 aaPredicted RBP12.64□□□□□ -0.39
NFKB1-201ENST00000226574 CTNSO60931 367 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 PI3P19957 117 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 GUCA2AQ02747 115 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 MESP2Q0VG99 397 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 ZNF77Q15935 545 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 ZBTB37Q5TC79 503 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 FGF20Q9NP95 211 aaPredicted RBP12.64□□□□□ -0.39
NFKB1-201ENST00000226574 HHLA2Q9UM44 414 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 SLC22A13Q9Y226 551 aa12.64□□□□□ -0.39
NFKB1-201ENST00000226574 WNT1P04628 370 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 RAB6AP20340 208 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 BTG2P78543 158 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 TNK1Q13470 666 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 RUNX2Q13950 521 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 SLC6A19Q695T7 634 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 SPPL3Q8TCT6 385 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 ST8SIA4Q92187 359 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 RGCCQ9H4X1 137 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 CCDC86Q9H6F5 360 aaKnown RBP12.63□□□□□ -0.39
NFKB1-201ENST00000226574 SFXN1Q9H9B4 322 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 HRASLSQ9HDD0 168 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 TRAPPC4Q9Y296 219 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 EPXP11678 715 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 CBR1P16152 277 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 FGL1Q08830 312 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 TEX261Q6UWH6 196 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 OR5M1Q8NGP8 315 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 GOT1L1Q8NHS2 421 aaPredicted RBP12.63□□□□□ -0.39
NFKB1-201ENST00000226574 MAP3K3Q99759 626 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 TMEM231Q9H6L2 316 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 U3KQ87 197 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 A0A0J9YY10 115 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 TMEM235A6NFC5 223 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 SERINC4A6NH21 518 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 CHP2O43745 196 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 GAAP10253 952 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 PKLRP30613 574 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 SIGIRRQ6IA17 410 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 TMEM234Q8WY98 164 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 RSC1A1Q92681 617 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 FAM3DQ96BQ1 224 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 HHIPL1Q96JK4 782 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 EMC6Q9BV81 110 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 APMAPQ9HDC9 416 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 UBQLN4Q9NRR5 601 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 CYSLTR2Q9NS75 346 aa12.63□□□□□ -0.39
NFKB1-201ENST00000226574 PRAMEF25A6NGN4 478 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 SEC14L5O43304 696 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 PAPLNO95428 1278 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 CDK5Q00535 292 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 TEKQ02763 1124 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 ALKBH1Q13686 389 aaKnown RBP12.62□□□□□ -0.39
NFKB1-201ENST00000226574 ST3GAL2Q16842 350 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 LINC00303Q3SY05 128 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 CORO6Q6QEF8 472 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 ZNF704Q6ZNC4 412 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-201ENST00000226574 ZFP82Q8N141 532 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 OR5H2Q8NGV7 314 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 DIO2Q92813 273 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 NECAB3Q96P71 396 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-201ENST00000226574 URM1Q9BTM9 101 aaKnown RBP12.62□□□□□ -0.39
NFKB1-201ENST00000226574 RBM24Q9BX46 236 aaKnown RBP12.62□□□□□ -0.39
NFKB1-201ENST00000226574 BCL2L10Q9HD36 194 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 RPS10P5Q9NQ39 176 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 SIRT3Q9NTG7 399 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-201ENST00000226574 IL20Q9NYY1 176 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 CD14P08571 375 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 EMP2P54851 167 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 C3orf33Q6P1S2 294 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 ADAMTSL4Q6UY14 1074 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 CAMKMTQ7Z624 323 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 RASGRP3Q8IV61 690 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 ZNF649Q9BS31 505 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 WASH6PQ9NQA3 447 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 HEXBP07686 556 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 HOXC8P31273 242 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 HNF4GQ14541 408 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 DUSP6Q16828 381 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 VRK1Q99986 396 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-201ENST00000226574 OR10A5Q9H207 317 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms