RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 TMEM200AQ86VY9 491 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 PARGQ86W56 976 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 SMARCD2Q92925 531 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 HRH4Q9H3N8 390 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 SHPKQ9UHJ6 478 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 MED12Q93074 2177 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 NUP210Q8TEM1 1887 aaPredicted RBP13.12□□□□□ -0.31
SFXN3-201ENST00000224807 ANKRD20A5PA0PJZ0 165 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 OR2M5A3KFT3 312 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 C5orf51A6NDU8 294 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 PAPLNO95428 1278 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 DCNP07585 359 aaKnown RBP13.12□□□□□ -0.31
SFXN3-201ENST00000224807 SPP1P10451 314 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 LIPNQ5VXI9 398 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 GRASPQ7Z6J2 395 aaPredicted RBP13.12□□□□□ -0.31
SFXN3-201ENST00000224807 SDR16C5Q8N3Y7 309 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 OR2L5Q8NG80 312 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 SYNDIG1Q9H7V2 258 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 CGGBP1Q9UFW8 167 aaPredicted RBP13.12□□□□□ -0.31
SFXN3-201ENST00000224807 NPTNQ9Y639 398 aa13.12□□□□□ -0.31
SFXN3-201ENST00000224807 OR6C76A6NM76 312 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 KLF4O43474 513 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 AKR1C4P17516 323 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 DPP4P27487 766 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 SLC6A6P31641 620 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 FRKP42685 505 aaPredicted RBP13.11□□□□□ -0.31
SFXN3-201ENST00000224807 SLC7A9P82251 487 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 BDH1Q02338 343 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 GLT8D1Q68CQ7 371 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 H3F3CQ6NXT2 135 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 ETV3LQ6ZN32 361 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 DPY19L4Q7Z388 723 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 OR2W3Q7Z3T1 314 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 FAM220AQ7Z4H9 259 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 RGP1Q92546 391 aaPredicted RBP13.11□□□□□ -0.31
SFXN3-201ENST00000224807 NSMAFQ92636 917 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 PNPLA2Q96AD5 504 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 UQCC2Q9BRT2 126 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 PELOQ9BRX2 385 aaKnown RBP13.11□□□□□ -0.31
SFXN3-201ENST00000224807 CARNS1A5YM72 827 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 DUXAA6NLW8 204 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 PTP4A3O75365 173 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 B3GALNT1O75752 331 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 HLA-AP01891 365 aaKnown RBP13.11□□□□□ -0.31
SFXN3-201ENST00000224807 FAUP35544 74 aaKnown RBP13.11□□□□□ -0.31
SFXN3-201ENST00000224807 ATP1B3P54709 279 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 HTRA4P83105 476 aaPredicted RBP13.11□□□□□ -0.31
SFXN3-201ENST00000224807 CSRP2Q16527 193 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 RBMS3Q6XE24 437 aaKnown RBP13.11□□□□□ -0.31
SFXN3-201ENST00000224807 NRROSQ86YC3 692 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 CHST4Q8NCG5 386 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 OR4K14Q8NGD5 310 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 TMED6Q8WW62 240 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 MS4A4EQ96PG1 132 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 LMAN2LQ9H0V9 348 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 PRSS16Q9NQE7 514 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 KLHDC2Q9Y2U9 406 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 OR14I1A6ND48 311 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 LINC00587B1AMM8 73 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 TXNL1O43396 289 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 ALOX12BO75342 701 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 CLEC3AO75596 197 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 ST6GAL1P15907 406 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 POU3F4P49335 361 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 RAB28P51157 221 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 CDK3Q00526 305 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 TRAM1Q15629 374 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 LDLRAD3Q86YD5 345 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 OR5AK2Q8NH90 309 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 SLC6A7Q99884 636 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 DNTTIP1Q9H147 329 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 IFT22Q9H7X7 185 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 PELI2Q9HAT8 420 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 FLRT3Q9NZU0 649 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 ZNF281Q9Y2X9 895 aa13.11□□□□□ -0.31
SFXN3-201ENST00000224807 LAMA1P25391 3075 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 OR5H14A6NHG9 310 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 C11orf98E9PRG8 122 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 OR2T1O43869 369 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 HPP00738 406 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 PSMD4P55036 377 aaKnown RBP13.1□□□□□ -0.31
SFXN3-201ENST00000224807 PPP2CBP62714 309 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 PPP2CAP67775 309 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 DEFB110Q30KQ9 67 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 C12orf45Q8N5I9 185 aaPredicted RBP13.1□□□□□ -0.31
SFXN3-201ENST00000224807 FAM71CQ8NEG0 241 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 OR8D1Q8WZ84 308 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 GIMAP5Q96F15 307 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 RSPH9Q9H1X1 276 aaPredicted RBP13.1□□□□□ -0.31
SFXN3-201ENST00000224807 MRPS2Q9Y399 296 aaKnown RBP13.1□□□□□ -0.31
SFXN3-201ENST00000224807 INSL6Q9Y581 213 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 CFAP54Q96N23 3096 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 HIDE1A8MVS5 230 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 TBX19O60806 448 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 RAB3DO95716 219 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 PRNPP04156 253 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 SNRPEP62304 92 aaKnown RBP13.1□□□□□ -0.31
SFXN3-201ENST00000224807 ACTC1P68032 377 aa13.1□□□□□ -0.31
SFXN3-201ENST00000224807 ACTA1P68133 377 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms