RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ARMC6Q6NXE6 501 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 KIAA1324Q6UXG2 1013 aaKnown RBP12.12□□□□□ -0.47
SRP54-201ENST00000216774 LRRTM1Q86UE6 522 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 CDC20BQ86Y33 519 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 LRRC75AQ8NAA5 344 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 ZNF511Q8NB15 262 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 THEM6Q8WUY1 208 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 MNTQ99583 582 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 FRRS1LQ9P0K9 344 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 PIPOXQ9P0Z9 390 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 PLSCR5A0PG75 271 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 TMEM72A0PK05 275 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 FAM171A2A8MVW0 826 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 SERPINI2O75830 405 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 OR2A4O95047 310 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 RPP14O95059 124 aaKnown RBP12.12□□□□□ -0.47
SRP54-201ENST00000216774 ADRA2CP18825 462 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 RABIFP47224 123 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 TPMTP51580 245 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 NNATQ16517 81 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 DEFB110Q30KQ9 67 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 LINC00303Q3SY05 128 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 ALG10Q5BKT4 473 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 WDR45BQ5MNZ6 344 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 FAM109BQ6ICB4 259 aaPredicted RBP12.12□□□□□ -0.47
SRP54-201ENST00000216774 ATG4DQ86TL0 474 aaPredicted RBP12.12□□□□□ -0.47
SRP54-201ENST00000216774 MCATQ8IVS2 390 aaKnown RBP12.12□□□□□ -0.47
SRP54-201ENST00000216774 MEIOBQ8N635 442 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 C19orf47Q8N9M1 422 aaKnown RBP12.12□□□□□ -0.47
SRP54-201ENST00000216774 LSM14AQ8ND56 463 aaKnown RBP12.12□□□□□ -0.47
SRP54-201ENST00000216774 OR2T4Q8NH00 348 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 PIGKQ92643 395 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 CCDC74AQ96AQ1 378 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 ADAD1Q96M93 576 aaKnown RBP12.12□□□□□ -0.47
SRP54-201ENST00000216774 OR2A7Q96R45 310 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 SEC22CQ9BRL7 303 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 TMPRSS13Q9BYE2 586 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 OR10A5Q9H207 317 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 PRTFDC1Q9NRG1 225 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 ZNF69Q9UC07 566 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 KLHDC2Q9Y2U9 406 aa12.12□□□□□ -0.47
SRP54-201ENST00000216774 GLSO94925 669 aaPredicted RBP12.11□□□□□ -0.47
SRP54-201ENST00000216774 CFDP00746 253 aaPredicted RBP12.11□□□□□ -0.47
SRP54-201ENST00000216774 CTSBP07858 339 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 CTHP32929 405 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 FAUP35544 74 aaKnown RBP12.11□□□□□ -0.47
SRP54-201ENST00000216774 CBFBQ13951 182 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 AANATQ16613 207 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 STPG1Q5TH74 334 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 NUP54Q7Z3B4 507 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 ZNF417Q8TAU3 575 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 MMP25Q9NPA2 562 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 EXOSC3Q9NQT5 275 aaKnown RBP12.11□□□□□ -0.47
SRP54-201ENST00000216774 WSB2Q9NYS7 404 aaPredicted RBP12.11□□□□□ -0.47
SRP54-201ENST00000216774 KIF25Q9UIL4 384 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 ERVK-19Q9WJR5 959 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 CLDN16Q9Y5I7 305 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 ARHGEF17Q96PE2 2063 aaPredicted RBP12.11□□□□□ -0.47
SRP54-201ENST00000216774 TRBV5-7A0A0A0MS05 114 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 A0A1W2PPL8 197 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 HSPB2A8KAH6 182 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 SRPX2O60687 465 aaPredicted RBP12.11□□□□□ -0.47
SRP54-201ENST00000216774 ZNF254O75437 659 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 CDC123O75794 336 aaPredicted RBP12.11□□□□□ -0.47
SRP54-201ENST00000216774 ASAH2BP0C7U1 165 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 CFPP27918 469 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 DCTDP32321 178 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 CTXN1P60606 82 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 RPS15P62841 145 aaKnown RBP12.11□□□□□ -0.47
SRP54-201ENST00000216774 OPCMLQ14982 345 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 HSPB2Q16082 182 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 FNDC7Q5VTL7 733 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 TMEM184AQ6ZMB5 413 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 SFTPA2Q8IWL1 248 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 SDR16C5Q8N3Y7 309 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 C10orf53Q8N6V4 93 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 ZNF615Q8N8J6 731 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 OR13H1Q8NG92 308 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 CHIAQ9BZP6 476 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 UBQLN4Q9NRR5 601 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 PRODH2Q9UF12 536 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 PCDHGA5Q9Y5G8 931 aa12.11□□□□□ -0.47
SRP54-201ENST00000216774 TICRRQ7Z2Z1 1910 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 ARPC4-TTLL3A0A0A6YYG9 625 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 LOC105371267A0A1B0GV96 52 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 OR2M5A3KFT3 312 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 TMEM212A6NML5 194 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 ANXA2P2A6NMY6 339 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 XRCC3O43542 346 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 ALDOBP05062 364 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 ANXA2P07355 339 aaKnown RBP12.1□□□□□ -0.47
SRP54-201ENST00000216774 PGDP52209 483 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 PSMA6P60900 246 aaKnown RBP12.1□□□□□ -0.47
SRP54-201ENST00000216774 LTBQ06643 244 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 EGR3Q06889 387 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 SRSF5Q13243 272 aaKnown RBP12.1□□□□□ -0.47
SRP54-201ENST00000216774 SKP2Q13309 424 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 TMPRSS12Q86WS5 348 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 ZNF227Q86WZ6 799 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 GLB1L2Q8IW92 636 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms