RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Gm21854A0A087WNM4 232 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1157A2AVC4 312 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm10375L7N286 184 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Rab8bP61028 207 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Pgap2Q3TQR0 254 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Fkbp10Q61576 581 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Zfp729bQ80VN4 1045 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 BanpQ8VBU8 548 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ak6Q8VCP8 172 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr469Q8VF66 314 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 HnrnpllQ921F4 591 aaKnown RBP11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cdca4Q9CWM2 237 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Slc2a1P17809 492 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gabra2P26048 451 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Rps5P97461 204 aaKnown RBP11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Hepacam2Q4VAH7 463 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 SelenoiQ80TA1 398 aa11.18□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1234A2AVK5 314 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mc3rP33033 323 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vangl1Q80Z96 526 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Fam210aQ8BGY7 273 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 IqcjQ8BPW0 110 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn1r215Q8R264 300 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mettl21AQ9CQL0 218 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Psmg2Q9EST4 264 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm10721J3QPJ9 223 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 P01881 257 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 P01882 290 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 C4bpaP08607 469 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Il1r1P13504 576 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ube2g2P60605 165 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Lrrc28Q3TX51 367 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tfap2cQ61312 449 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Or51e2Q8VBV9 320 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Lamtor5Q9D1L9 91 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tmem239Q9DA47 151 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 St6galnac4Q9R2B6 360 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1039A2ARY0 319 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cnep1r1Q3UJ81 125 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Fut10Q5F2L2 481 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr503Q7TRU8 323 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Neu4Q8BZL1 478 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Rbms1Q91W59 403 aaKnown RBP11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cacng3Q9JJV5 315 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Clec4dQ9Z2H6 219 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn2r88L7N1W8 857 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Uba1yP31254 1058 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn1r198Q8R263 300 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Neto1Q8R4I7 533 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Slc22a26Q91WJ2 552 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Zfp773Q9CZ29 471 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 ShpkQ9D5J6 476 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Dok3Q9QZK7 444 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm13178B1AVU7 408 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 CpoxP36552 443 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Zfp987Q32P14 633 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Bbs12Q5SUD9 708 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Il17aQ62386 158 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Prr14Q7TPN9 612 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1135Q7TR42 310 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tmprss7Q8BIK6 829 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Fbxw17Q8CFE8 466 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn1r30Q8R2D2 302 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mrgpra8Q91ZC4 305 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Prdx4O08807 274 aaKnown RBP11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 NfkbieO54910 364 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Alg6Q3TAE8 507 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tmem248Q3TBN1 314 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Zp1Q62005 623 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 ManeaQ6NXH2 462 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Fam57bQ7TNV1 275 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Elmod2Q8BGF6 293 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tmem41bQ8K1A5 291 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn1r210Q8R274 306 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr796Q8VGJ1 310 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cdc42ep1Q91W92 409 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Fut2Q9JL27 347 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm4969D3YZT1 566 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn1r159K7N701 305 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1249L7MU51 318 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Drd2P61168 444 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Pnrc1Q3TWH3 297 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Rab35Q6PHN9 201 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr366Q7TRY4 309 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Zfp955aQ80XR7 545 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Bcas1Q80YN3 633 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Enpp6Q8BGN3 440 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Zc3h12dQ8BIY3 533 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gpr107Q8BUV8 551 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mfsd9Q8C0T7 466 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 CcsapQ8QZT2 252 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Popdc3Q9ES81 291 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 IqckD3YYL3 290 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Kcnj1O88335 372 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Lrrc3P59034 257 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr125Q14AJ9 320 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Zc2hc1cQ8CCG1 527 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 HinfpQ8K1K9 503 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gtf2h5Q8K2X8 71 aa11.17□□□□□ -0.62
Trim56-201ENSMUST00000054384 C2cd6E9Q152 557 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 63.3 ms