RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Hist1h2aoC0HKE8 130 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Hist1h2apC0HKE9 130 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Amd2D3Z6H8 334 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Zfp619G3X9T2 1161 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Camk2aP11798 478 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Actr1aP61164 376 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Pgap2Q3TQR0 254 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 RflnbQ5SVD0 216 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Fam122bQ6NZE7 255 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr857Q7TRF7 309 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Hist3h2aQ8BFU2 130 aaKnown RBP10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Slc9a7Q8BLV3 726 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Kbtbd11Q8BNW9 633 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Zfp101Q8BP18 612 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Lrrn3Q8CBC6 707 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Hist1h2afQ8CGP5 130 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Hist1h2akQ8CGP7 130 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Csnka2ipQ8CH19 720 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Actr1bQ8R5C5 376 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr1504Q8VFQ4 315 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Ccl27Q9Z1X0 120 aa10.49□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Vmn1r90A0A087WR36 309 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Myadml2Q08AU7 307 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Mmp7Q10738 264 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Perm1Q149B8 807 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gpr55Q3UJF0 327 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cd53Q61451 219 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Carnmt1Q80UY1 400 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 RergQ8R367 199 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr583Q8VG25 319 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 PnpoQ91XF0 261 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Fam69bQ99ML4 431 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Dnah12Q3V0Q1 3086 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm21488A0A087WR99 222 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Zbtb25G3UW50 439 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Vmn2r75G5E8Z7 853 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 PrnpP04925 254 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 MpoP11247 718 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 FgrP14234 517 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Sox7P40646 380 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Acsl1P41216 699 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 GdnfP48540 211 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Tbx4P70325 552 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 MakQ04859 622 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Alkbh3Q8K1E6 286 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Vmn1r228Q8R2A7 333 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Dusp15Q8R4V2 235 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr1388Q8VFA3 311 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 PbkQ9JJ78 330 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 TsnaxQ9QZE7 290 aaKnown RBP10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm21854A0A087WNM4 232 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cldn20G5E8X0 219 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Spsb2O88838 264 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gna13P27601 377 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cpne2P59108 548 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Atp5a1Q03265 553 aaKnown RBP10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 AhrrQ3U1U7 701 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 XkrxQ5GH68 449 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 St6gal1Q64685 403 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Ap5m1Q8BJ63 490 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Lrrtm1Q8K377 522 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Wdr45Q91VM3 360 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Rpe65Q91ZQ5 533 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Scgb3a1Q920D7 104 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Camk2gQ923T9 529 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Dapl1Q9D757 107 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Mmp1bQ9EPL6 463 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Slco2a1Q9EPT5 643 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gde1Q9JL56 331 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 PtgesQ9JM51 153 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Eci2Q9WUR2 391 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 B4galt2Q9Z2Y2 369 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Prr32A2AFE9 284 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Zfp345A2AQA1 561 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Tmem215A7E1Z1 235 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Hoxb9P20615 250 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Sec61a1P61620 476 aaKnown RBP10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Clvs2Q8BG92 327 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Tmem255aQ8BHW5 351 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Pamr1Q8BU25 720 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr1122Q8VGT9 326 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Lcn9Q9D267 178 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 DynapQ9D7M5 161 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Nr4a3Q9QZB6 627 aa10.48□□□□□ -0.73
Topbp1-201ENSMUST00000035164 A0A1L1SV24 88 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm2022A0A1Y7VLT7 144 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Mrap2D3Z1Q2 207 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Zfp97E9PZP6 546 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Zfp960L7N267 546 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm10750Q3V0I0 133 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Taar7bQ5QD11 358 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Hist2h2abQ64522 130 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Kiss1Q6Y4S4 130 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Pxylp1Q8BHA9 480 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 ZxdcQ8C8V1 858 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 GnalQ8CGK7 381 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr781Q8VFZ8 311 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Kiss1rQ91V45 396 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Tinagl1Q99JR5 466 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Yipf2Q99LP8 312 aa10.47□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms