RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	CYBRD1	Q53TN4	286 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	C1QTNF12	Q5T7M4	302 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	TMEM108	Q6UXF1	575 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	UEVLD	Q8IX04	471 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	LRRC75A-AS1	Q8N1F1	130 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	WDR31	Q8NA23	367 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	KBTBD8	Q8NFY9	601 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	FBXW5	Q969U6	566 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	LINC00470	Q9BZP3	86 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	POLR2J2	Q9GZM3	115 aa	Known RBP	13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	POLR2J3	Q9H1A7	115 aa	Known RBP	13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	GMPR2	Q9P2T1	348 aa	Known RBP	13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	NME4	O00746	187 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	PLPP3	O14495	311 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	ABCD4	O14678	606 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	TRAF3IP2	O43734	574 aa	Predicted RBP	13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	SLC43A1	O75387	559 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	HPR	P00739	348 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	PTAFR	P25105	342 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	OR1E2	P47887	323 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	TAS2R41	P59536	307 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	GNGT1	P63211	74 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	NKX6-1	P78426	367 aa	Predicted RBP	13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	SHE	Q5VZ18	495 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	HMBOX1	Q6NT76	420 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	KLHL24	Q6TFL4	600 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	DEF8	Q6ZN54	512 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	LINGO2	Q7L985	606 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	OR5J2	Q8NH18	312 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	TMEM171	Q8WVE6	324 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	IGFBPL1	Q8WX77	278 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	NEUROG1	Q92886	237 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	BOD1	Q96IK1	185 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	TPD52L3	Q96J77	140 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	PRSS27	Q9BQR3	290 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	ZNF426	Q9BUY5	554 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	TMUB1	Q9BVT8	246 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	SLC19A3	Q9BZV2	496 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	ALG2	Q9H553	416 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	FKRP	Q9H9S5	495 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	MGAT4B	Q9UQ53	548 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	NOX1	Q9Y5S8	564 aa		13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.18	□□□□□ -0.3
PHGDH-231	ENST00000641939	KPNA4	O00629	521 aa	Predicted RBP	13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	NDUFAB1	O14561	156 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	ARHGEF9	O43307	516 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	SHOX2	O60902	331 aa	Predicted RBP	13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	TMCC2	O75069	709 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	OR5F1	O95221	314 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	CH25H	O95992	272 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	WNT11	O96014	354 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	HLA-DOB	P13765	273 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	CD99	P14209	185 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	PRDX6	P30041	224 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	SH3BGR	P55822	239 aa	Predicted RBP	13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	PRPS1	P60891	318 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	SELENOW	P63302	87 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	SLC25A3	Q00325	362 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	ROR2	Q01974	943 aa	Known RBP	13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	POU3F1	Q03052	451 aa	Predicted RBP	13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	FOXD4	Q12950	439 aa	Predicted RBP	13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	ZNF74	Q16587	644 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	HIKESHI	Q53FT3	197 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	PXK	Q7Z7A4	578 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	TMEM123	Q8N131	208 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	GPR137C	Q8N3F9	429 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	PIK3C3	Q8NEB9	887 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	ANKK1	Q8NFD2	765 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	OR1K1	Q8NGR3	316 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	LZIC	Q8WZA0	190 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	RADIL	Q96JH8	1075 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	OR2M2	Q96R28	347 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	C1QTNF6	Q9BXI9	259 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	CXorf56	Q9H5V9	222 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	OBP2B	Q9NPH6	170 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	NANS	Q9NR45	359 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	RIMS3	Q9UJD0	308 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	C2CD3	Q4AC94	2353 aa		13.17	□□□□□ -0.3
PHGDH-231	ENST00000641939	SHISA9	B4DS77	424 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	RPL36A-HNRNPH2	H7BZ11	118 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939		M0R1B8	84 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	CXCR6	O00574	342 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	GSTA4	O15217	222 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	OR6A2	O95222	327 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	ADORA3	P0DMS8	318 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	AHCY	P23526	432 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	CD40	P25942	277 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	RBM34	P42696	430 aa	Known RBP	13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	GSK3B	P49841	420 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	CDH11	P55287	796 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	PSME3	P61289	254 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	PIN1	Q13526	163 aa	Predicted RBP	13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	TBRG1	Q3YBR2	411 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	ANKRD16	Q6P6B7	361 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	NHLRC1	Q6VVB1	395 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	KRTAP1-3	Q8IUG1	177 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	NKAIN4	Q8IVV8	208 aa		13.16	□□□□□ -0.3
PHGDH-231	ENST00000641939	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms