RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 C1GALT1C1Q96EU7 318 aa12.18□□□□□ -0.46
HLA-C-210ENST00000640219 SLC35A5Q9BS91 424 aa12.18□□□□□ -0.46
HLA-C-210ENST00000640219 RIBC2Q9H4K1 309 aa12.18□□□□□ -0.46
HLA-C-210ENST00000640219 TMEM185BQ9H7F4 350 aa12.18□□□□□ -0.46
HLA-C-210ENST00000640219 WARS2Q9UGM6 360 aaKnown RBP12.18□□□□□ -0.46
HLA-C-210ENST00000640219 KCNE5Q9UJ90 142 aa12.18□□□□□ -0.46
HLA-C-210ENST00000640219 MRTO4Q9UKD2 239 aaKnown RBP12.18□□□□□ -0.46
HLA-C-210ENST00000640219 ZNF337Q9Y3M9 751 aa12.18□□□□□ -0.46
HLA-C-210ENST00000640219 GMPPBQ9Y5P6 360 aa12.18□□□□□ -0.46
HLA-C-210ENST00000640219 GMEB1Q9Y692 573 aa12.18□□□□□ -0.46
HLA-C-210ENST00000640219 OR2M5A3KFT3 312 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 ALG1L2C9J202 215 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 NDUFB5O43674 189 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 FCMRO60667 390 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 IFNA14P01570 189 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 CD3EP07766 207 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 IGHV4-31P0DP07 118 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 PEPDP12955 493 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 NUDT6P53370 316 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 PSMD4P55036 377 aaKnown RBP12.17□□□□□ -0.46
HLA-C-210ENST00000640219 DSCR4P56555 118 aaPredicted RBP12.17□□□□□ -0.46
HLA-C-210ENST00000640219 DSCR9P59020 149 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 IL1RL1Q01638 556 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 ZNF117Q03924 483 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 CD47Q08722 323 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 TMED1Q13445 227 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 GUSBP1Q15486 140 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 GPR68Q15743 365 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 TOMM34Q15785 309 aaPredicted RBP12.17□□□□□ -0.46
HLA-C-210ENST00000640219 PGGHGQ32M88 737 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 ZNF829Q3KNS6 432 aaPredicted RBP12.17□□□□□ -0.46
HLA-C-210ENST00000640219 ZNF672Q499Z4 452 aaPredicted RBP12.17□□□□□ -0.46
HLA-C-210ENST00000640219 COX20Q5RI15 118 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 FAM120AOSQ5T036 256 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 FAM214BQ7L5A3 538 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 PIWIL3Q7Z3Z3 882 aaKnown RBP12.17□□□□□ -0.46
HLA-C-210ENST00000640219 PHOSPHO1Q8TCT1 267 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 STACQ99469 402 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 TRAF4Q9BUZ4 470 aaPredicted RBP12.17□□□□□ -0.46
HLA-C-210ENST00000640219 PINK1Q9BXM7 581 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 CCDC90BQ9GZT6 254 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 QRSL1Q9H0R6 528 aaKnown RBP12.17□□□□□ -0.46
HLA-C-210ENST00000640219 CHODLQ9H9P2 273 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 TPT1P8Q9HAU6 139 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 PLSCR4Q9NRQ2 329 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 DUSP22Q9NRW4 184 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 MKLN1Q9UL63 735 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 KCNS2Q9ULS6 477 aa12.17□□□□□ -0.46
HLA-C-210ENST00000640219 SAMHD1Q9Y3Z3 626 aaKnown RBP12.17□□□□□ -0.46
HLA-C-210ENST00000640219 SH3PXD2BA1X283 911 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 ELOA3DA6NLF2 546 aaPredicted RBP12.16□□□□□ -0.46
HLA-C-210ENST00000640219 ZNF99A8MXY4 864 aaPredicted RBP12.16□□□□□ -0.46
HLA-C-210ENST00000640219 SLC1A7O00341 560 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 SCDO00767 359 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 CD8AP01732 235 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 IL7RP16871 459 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 HNF1AP20823 631 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 SHC1P29353 583 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 ISL1P61371 349 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 PSPHP78330 225 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 CDK5R2Q13319 367 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 MAPK14Q16539 360 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 ELOA3BQ3SY89 546 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 NCMAPQ5T1S8 102 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 PDZK1Q5T2W1 519 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 SAXO2Q658L1 398 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 ZCCHC12Q6PEW1 402 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 RNF130Q86XS8 419 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 SLC30A8Q8IWU4 369 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 ATG16L2Q8NAA4 619 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 C11orf65Q8NCR3 313 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 BPIFB6Q8NFQ5 453 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 ELOA3Q8NG57 546 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 SGMS2Q8NHU3 365 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 FNDC9Q8TBE3 224 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 POC1BQ8TC44 478 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 IPCEF1Q8WWN9 437 aaPredicted RBP12.16□□□□□ -0.46
HLA-C-210ENST00000640219 RORBQ92753 470 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 ZNF347Q96SE7 839 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 SDF2Q99470 211 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 PALMDQ9NP74 551 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 FANCFQ9NPI8 374 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 KRT84Q9NSB2 600 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 PDP1Q9P0J1 537 aaPredicted RBP12.16□□□□□ -0.46
HLA-C-210ENST00000640219 CARD8Q9Y2G2 431 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 MRPS18CQ9Y3D5 142 aaKnown RBP12.16□□□□□ -0.46
HLA-C-210ENST00000640219 ZNF175Q9Y473 711 aa12.16□□□□□ -0.46
HLA-C-210ENST00000640219 SVEP1Q4LDE5 3571 aa12.15□□□□□ -0.46
HLA-C-210ENST00000640219 TENM1Q9UKZ4 2725 aa12.15□□□□□ -0.46
HLA-C-210ENST00000640219 SLC35F4A4IF30 521 aa12.15□□□□□ -0.46
HLA-C-210ENST00000640219 TTC36A6NLP5 189 aa12.15□□□□□ -0.46
HLA-C-210ENST00000640219 CLDN24A6NM45 220 aa12.15□□□□□ -0.46
HLA-C-210ENST00000640219 PTGES3LE9PB15 166 aa12.15□□□□□ -0.46
HLA-C-210ENST00000640219 M0QX08 132 aa12.15□□□□□ -0.46
HLA-C-210ENST00000640219 TCF21O43680 179 aa12.15□□□□□ -0.46
HLA-C-210ENST00000640219 HPGDP15428 266 aa12.15□□□□□ -0.46
HLA-C-210ENST00000640219 SLC25A16P16260 332 aa12.15□□□□□ -0.46
HLA-C-210ENST00000640219 ITGA2P17301 1181 aa12.15□□□□□ -0.46
HLA-C-210ENST00000640219 PRKACGP22612 351 aa12.15□□□□□ -0.46
HLA-C-210ENST00000640219 UQCRC2P22695 453 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms