RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 TRIQKQ629K1 86 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 GHDCQ8N2G8 530 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 LRRC75AQ8NAA5 344 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 NFAM1Q8NET5 270 aaPredicted RBP13.7□□□□□ -0.22
TRIM3-215ENST00000639856 OR6K6Q8NGW6 343 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 ZNF563Q8TA94 476 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 THAP3Q8WTV1 239 aaPredicted RBP13.7□□□□□ -0.22
TRIM3-215ENST00000639856 OMA1Q96E52 524 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 Q96M85 177 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 TTYH2Q9BSA4 534 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 C12orf10Q9HB07 376 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 TEX13CA0A0J9YWL9 993 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 A0A1W2PRG6 482 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 FAM25AB3EWG3 89 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 FAM25CB3EWG5 89 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 FAM25GB3EWG6 89 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 GMFGO60234 142 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 SELENOFO60613 162 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 TSPAN2O60636 221 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 GLCEO94923 617 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 SERPINA3P01011 423 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 CD14P08571 375 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 ELK1P19419 428 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 THBS2P35442 1172 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 CDKN2AP42771 156 aaKnown RBP13.7□□□□□ -0.22
TRIM3-215ENST00000639856 SLC6A8P48029 635 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 GDI2P50395 445 aaKnown RBP13.7□□□□□ -0.22
TRIM3-215ENST00000639856 OR10A3P58181 314 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 RNF4P78317 190 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 SIRPAP78324 504 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 SF3A2Q15428 464 aaKnown RBP13.7□□□□□ -0.22
TRIM3-215ENST00000639856 ALG10Q5BKT4 473 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 SFXN4Q6P4A7 337 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 LEG1Q6P5S2 330 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 NUP54Q7Z3B4 507 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 LRRC28Q86X40 367 aaPredicted RBP13.7□□□□□ -0.22
TRIM3-215ENST00000639856 C19orf18Q8NEA5 215 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 METTL21AQ8WXB1 218 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 LOXL4Q96JB6 756 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 WDR77Q9BQA1 342 aaPredicted RBP13.7□□□□□ -0.22
TRIM3-215ENST00000639856 CRB3Q9BUF7 120 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 ADAM19Q9H013 955 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 SLC6A5Q9Y345 797 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 PCDHGA5Q9Y5G8 931 aa13.7□□□□□ -0.22
TRIM3-215ENST00000639856 PCNX3Q9H6A9 2034 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 A0A0G2JK05 382 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 TO15178 435 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 FLRT2O43155 660 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 CCNKO75909 580 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 GP1BAP07359 652 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 TACR3P29371 465 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 UQCRC1P31930 480 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 RPS5P46782 204 aaKnown RBP13.69□□□□□ -0.22
TRIM3-215ENST00000639856 CLDN6P56747 220 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 ZNF117Q03924 483 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 HSF2Q03933 536 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 LTBQ06643 244 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 LINC01590Q5TEZ4 76 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 MRPL14Q6P1L8 145 aaKnown RBP13.69□□□□□ -0.22
TRIM3-215ENST00000639856 RPL22L1Q6P5R6 122 aaKnown RBP13.69□□□□□ -0.22
TRIM3-215ENST00000639856 PAPD4Q6PIY7 484 aaKnown RBP13.69□□□□□ -0.22
TRIM3-215ENST00000639856 PAMR1Q6UXH9 720 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 RDH10Q8IZV5 341 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 OR13C5Q8NGS8 318 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 THAP4Q8WY91 577 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 MRPL48Q96GC5 212 aaKnown RBP13.69□□□□□ -0.22
TRIM3-215ENST00000639856 LPAR4Q99677 370 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 MMP28Q9H239 520 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 B3GAT2Q9NPZ5 323 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 CYSLTR2Q9NS75 346 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 NCDNQ9UBB6 729 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 COPS3Q9UNS2 423 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 A0A1W2PQD3 144 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 MEIOCA2RUB1 952 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 OR6C76A6NM76 312 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 TFECO14948 347 aaPredicted RBP13.69□□□□□ -0.22
TRIM3-215ENST00000639856 HCRTR2O43614 444 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 ZNF354AO60765 605 aaPredicted RBP13.69□□□□□ -0.22
TRIM3-215ENST00000639856 SERPINI2O75830 405 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 CD1AP06126 327 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 SDHAP31040 664 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 SLC25A1P53007 311 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 CTXN1P60606 82 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 CCDC58Q4VC31 144 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 MARCH3Q86UD3 253 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 JAZF1Q86VZ6 243 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 KTI12Q96EK9 354 aaPredicted RBP13.69□□□□□ -0.22
TRIM3-215ENST00000639856 ALG12Q9BV10 488 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 ULBP3Q9BZM4 244 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 SEMA4CQ9C0C4 833 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 SLC26A1Q9H2B4 701 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 EXTL2Q9UBQ6 330 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 GNG8Q9UK08 70 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 RASD1Q9Y272 281 aa13.69□□□□□ -0.22
TRIM3-215ENST00000639856 EXPH5Q8NEV8 1989 aa13.68□□□□□ -0.22
TRIM3-215ENST00000639856 TRAV1-2A0A0B4J238 106 aa13.68□□□□□ -0.22
TRIM3-215ENST00000639856 TRBV2A0A0J9YWF9 115 aa13.68□□□□□ -0.22
TRIM3-215ENST00000639856 B4DXG7 233 aa13.68□□□□□ -0.22
TRIM3-215ENST00000639856 ALG1L2C9J202 215 aa13.68□□□□□ -0.22
TRIM3-215ENST00000639856 CDX4O14627 284 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms