RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 KCNK15Q9H427 330 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 IFT22Q9H7X7 185 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 ZDHHC4Q9NPG8 344 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 ACTR10Q9NZ32 417 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 SERTAD3Q9UJW9 196 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 NOTCH4Q99466 2003 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 H7C417 338 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 MOSPD3O75425 235 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 RPP14O95059 124 aaKnown RBP18.74■□□□□ 0.59
PMS1-222ENST00000639501 DBIP07108 87 aaKnown RBP18.74■□□□□ 0.59
PMS1-222ENST00000639501 CALCBP10092 127 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 EFNB2P52799 333 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 GMFBP60983 142 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 DEFB103AP81534 67 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 BIVMQ86UB2 503 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 SFTPA1Q8IWL2 248 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 NSMAFQ92636 917 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 MTFP1Q9UDX5 166 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 ZNF337Q9Y3M9 751 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 PLEKHM1Q9Y4G2 1056 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 LTBP2Q14767 1821 aa18.74■□□□□ 0.59
PMS1-222ENST00000639501 KCNJ13O60928 360 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 MAPK3P27361 379 aaPredicted RBP18.73■□□□□ 0.59
PMS1-222ENST00000639501 ILF3Q12906 894 aaKnown RBP eCLIP18.73■□□□□ 0.59
PMS1-222ENST00000639501 C4orf46Q504U0 113 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 OR2L3Q8NG85 312 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 OR5T2Q8NGG2 359 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 Q96M85 177 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 ERVK-19Q9WJR5 959 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 A0A1B0GTH9 108 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 A0A1B0GTQ1 180 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 A0A1B0GWA3 101 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 RFPL4AA6NLU0 287 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 RFPL4AL1F8VTS6 287 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 LILRB3O75022 631 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 RBBP9O75884 186 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 NAT2P11245 290 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 MNDAP41218 407 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 LUMP51884 338 aaPredicted RBP18.73■□□□□ 0.59
PMS1-222ENST00000639501 LTBQ06643 244 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 KCNAB1Q14722 419 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 ZNF77Q15935 545 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 MOB3CQ70IA8 216 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 OR6N1Q8NGY5 312 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 WNT2BQ93097 391 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 ZNF768Q9H5H4 540 aaKnown RBP18.73■□□□□ 0.59
PMS1-222ENST00000639501 LHX6Q9UPM6 363 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 KCNK6Q9Y257 313 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 OR1A2Q9Y585 309 aa18.73■□□□□ 0.59
PMS1-222ENST00000639501 TRAV8-7A0A075B6U6 113 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 A0A0B4J2E0 115 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 A0A1B0GX12 115 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 PRRT4C9JH25 899 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 H2AFB1P0C5Y9 115 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 ZNF888P0CJ79 500 aaPredicted RBP18.72■□□□□ 0.59
PMS1-222ENST00000639501 MGMTP16455 207 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 AKR1C2P52895 323 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 ST8SIA6P61647 398 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 AKR1C1Q04828 323 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 EIF2B5Q13144 721 aaKnown RBP18.72■□□□□ 0.59
PMS1-222ENST00000639501 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.72■□□□□ 0.59
PMS1-222ENST00000639501 CACUL1Q86Y37 369 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 PHYHIPQ92561 330 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 APMAPQ9HDC9 416 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 SCAMP1O15126 338 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 AGR2O95994 175 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 CISD3P0C7P0 127 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 UBBP0CG47 229 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 UBCP0CG48 685 aaKnown RBP18.72■□□□□ 0.59
PMS1-222ENST00000639501 HOXA1P49639 335 aaPredicted RBP18.72■□□□□ 0.59
PMS1-222ENST00000639501 DIO1P49895 249 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 RPS27AP62979 156 aaKnown RBP18.72■□□□□ 0.59
PMS1-222ENST00000639501 UBA52P62987 128 aaKnown RBP18.72■□□□□ 0.59
PMS1-222ENST00000639501 HYAL4Q2M3T9 481 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 BEX5Q5H9J7 111 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 ZNF546Q86UE3 836 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 LRRTM1Q86UE6 522 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 PUSL1Q8N0Z8 303 aaKnown RBP18.72■□□□□ 0.59
PMS1-222ENST00000639501 TMEM185AQ8NFB2 350 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 OR52E1Q8NGJ3 308 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 OR8S1Q8NH09 359 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 DNTTIP1Q9H147 329 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 TCF7L1Q9HCS4 588 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 TRPM6Q9BX84 2022 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 CEP290O15078 2479 aa18.72■□□□□ 0.59
PMS1-222ENST00000639501 OR6C68A6NDL8 312 aa18.71■□□□□ 0.59
PMS1-222ENST00000639501 OR5K4A6NMS3 321 aa18.71■□□□□ 0.59
PMS1-222ENST00000639501 MAS1P04201 325 aa18.71■□□□□ 0.59
PMS1-222ENST00000639501 OR8G3PP0DMU2 310 aa18.71■□□□□ 0.59
PMS1-222ENST00000639501 CNR1P21554 472 aa18.71■□□□□ 0.59
PMS1-222ENST00000639501 PON3Q15166 354 aa18.71■□□□□ 0.59
PMS1-222ENST00000639501 CBLN2Q8IUK8 224 aa18.71■□□□□ 0.59
PMS1-222ENST00000639501 ZNF614Q8N883 585 aa18.71■□□□□ 0.59
PMS1-222ENST00000639501 OR8K3Q8NH51 312 aa18.71■□□□□ 0.59
PMS1-222ENST00000639501 FGF13Q92913 245 aa18.71■□□□□ 0.59
PMS1-222ENST00000639501 NKX3-1Q99801 234 aaPredicted RBP18.71■□□□□ 0.59
PMS1-222ENST00000639501 KLHDC2Q9Y2U9 406 aa18.71■□□□□ 0.59
PMS1-222ENST00000639501 GXYLT2A0PJZ3 443 aa18.71■□□□□ 0.59
PMS1-222ENST00000639501 CD3DP04234 171 aa18.71■□□□□ 0.59
PMS1-222ENST00000639501 GTF2F2P13984 249 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms