RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 LINC01590Q5TEZ4 76 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 OTPQ5XKR4 325 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 RPTNQ6XPR3 784 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 PIP4P1Q86T03 277 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 ZNF511Q8NB15 262 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 OR4K17Q8NGC6 315 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 MCFD2Q8NI22 146 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 SYT4Q9H2B2 425 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 PROK2Q9HC23 129 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 SRA1Q9HD15 236 aaKnown RBP19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 TXNL4BQ9NX01 149 aaKnown RBP19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 SSR3Q9UNL2 185 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 COPS3Q9UNS2 423 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 GRIP1Q9Y3R0 1128 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 SMIM30A4D0T7 59 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 J3QLW9 94 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 PLPP3O14495 311 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 DVL2O14641 736 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 ARHGEF9O43307 516 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 TXNDC12O95881 172 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 IMPDH2P12268 514 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 ZNF19P17023 458 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 APOBEC1P41238 236 aaKnown RBP19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 TUBA1BP68363 451 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 ACKR1Q16570 336 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 TMPRSS11AQ6ZMR5 421 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 TUBA1AQ71U36 451 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 EXD3Q8N9H8 876 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 UBL7Q96S82 380 aaPredicted RBP19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 ALG12Q9BV10 488 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 CDADC1Q9BWV3 514 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 C6orf62Q9GZU0 229 aaPredicted RBP19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 ISYNA1Q9NPH2 558 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 INIPQ9NRY2 104 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 ALPK2Q86TB3 2170 aa19.53■□□□□ 0.72
CHRNA7-228ENST00000637519 MSX1P28360 303 aa19.52■□□□□ 0.72
CHRNA7-228ENST00000637519 MXD1Q05195 221 aa19.52■□□□□ 0.72
CHRNA7-228ENST00000637519 GGTLC2Q14390 218 aa19.52■□□□□ 0.72
CHRNA7-228ENST00000637519 CRTC2Q53ET0 693 aaPredicted RBP19.52■□□□□ 0.72
CHRNA7-228ENST00000637519 TP53I3Q53FA7 332 aa19.52■□□□□ 0.72
CHRNA7-228ENST00000637519 STPG1Q5TH74 334 aa19.52■□□□□ 0.72
CHRNA7-228ENST00000637519 PM20D2Q8IYS1 436 aa19.52■□□□□ 0.72
CHRNA7-228ENST00000637519 ESX1Q8N693 406 aa19.52■□□□□ 0.72
CHRNA7-228ENST00000637519 JSRP1Q96MG2 331 aaPredicted RBP19.52■□□□□ 0.72
CHRNA7-228ENST00000637519 FOXN4Q96NZ1 517 aa19.52■□□□□ 0.72
CHRNA7-228ENST00000637519 HPF1Q9NWY4 346 aa19.52■□□□□ 0.72
CHRNA7-228ENST00000637519 RPH3AQ9Y2J0 694 aaPredicted RBP19.52■□□□□ 0.72
CHRNA7-228ENST00000637519 KNTC1P50748 2209 aa19.52■□□□□ 0.72
CHRNA7-228ENST00000637519 MED12Q93074 2177 aa19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 LOC101059948A0A1B0GTJ6 334 aa19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 DXOO77932 396 aaKnown RBP19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 F10P00742 488 aa19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 SHC1P29353 583 aa19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 RPS19P39019 145 aaKnown RBP19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 LGALS3BPQ08380 585 aa19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 POU4F2Q12837 409 aa19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 EIF3IQ13347 325 aaKnown RBP19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 ZNF404Q494X3 552 aa19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 LCN1P1Q5VSP4 162 aa19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 SLC35F2Q8IXU6 374 aa19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 OR6V1Q8N148 313 aa19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 FADS6Q8N9I5 356 aa19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 NLGN4YQ8NFZ3 816 aaPredicted RBP19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 OR6Q1Q8NGQ2 317 aa19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 HDHD5Q9BXW7 423 aa19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 PCDHGB6Q9Y5F9 930 aa19.52■□□□□ 0.71
CHRNA7-228ENST00000637519 PSMD9O00233 223 aa19.51■□□□□ 0.71
CHRNA7-228ENST00000637519 ETV2O00321 342 aaPredicted RBP19.51■□□□□ 0.71
CHRNA7-228ENST00000637519 OR6A2O95222 327 aa19.51■□□□□ 0.71
CHRNA7-228ENST00000637519 CD63P08962 238 aa19.51■□□□□ 0.71
CHRNA7-228ENST00000637519 CLEC2LP0C7M8 214 aa19.51■□□□□ 0.71
CHRNA7-228ENST00000637519 GABRA5P31644 462 aa19.51■□□□□ 0.71
CHRNA7-228ENST00000637519 ATP1A4Q13733 1029 aa19.51■□□□□ 0.71
CHRNA7-228ENST00000637519 WDFY1Q8IWB7 410 aa19.51■□□□□ 0.71
CHRNA7-228ENST00000637519 MRGPRX4Q96LA9 322 aa19.51■□□□□ 0.71
CHRNA7-228ENST00000637519 GNRHR2Q96P88 292 aa19.51■□□□□ 0.71
CHRNA7-228ENST00000637519 CPNE5Q9HCH3 593 aa19.51■□□□□ 0.71
CHRNA7-228ENST00000637519 SNTG1Q9NSN8 517 aa19.51■□□□□ 0.71
CHRNA7-228ENST00000637519 BABAM2Q9NXR7 383 aa19.51■□□□□ 0.71
CHRNA7-228ENST00000637519 ASPMQ8IZT6 3477 aa19.51■□□□□ 0.71
CHRNA7-228ENST00000637519 A0A0G2JMM0 328 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 A0A1W2PPB8 328 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 A0A1W2PRS3 328 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 TVP23AA6NH52 213 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 KIR3DP1A8MWS1 328 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 ZNF670-ZNF695F2Z2N8 137 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 GLCEO94923 617 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 HPP00738 406 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 BMP4P12644 408 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 ACVR1BP36896 505 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 DLX5P56178 289 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 RUNX1T1Q06455 604 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 ACSM1Q08AH1 577 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 PAQR8Q8TEZ7 354 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 DDIT4LQ96D03 193 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 TPK1Q9H3S4 243 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 PLGRKTQ9HBL7 147 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 AKIP1Q9NQ31 210 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 INPP5EQ9NRR6 644 aa19.5■□□□□ 0.71
CHRNA7-228ENST00000637519 IL17BQ9UHF5 180 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms