RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 SHARPINQ9H0F6 387 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 MYOZ1Q9NP98 299 aaPredicted RBP16.03■□□□□ 0.16
CLN6-220ENST00000637450 SLAMF8Q9P0V8 285 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 YLPM1P49750 1951 aaKnown RBP16.03■□□□□ 0.16
CLN6-220ENST00000637450 IGKV1D-42A0A075B6H8 117 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 LOC390937A0A1W2PQ73 354 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 M0R082 166 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 PHF1O43189 567 aaPredicted RBP16.02■□□□□ 0.16
CLN6-220ENST00000637450 ARAFP10398 606 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 GRPRP30550 384 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 GGTLC2Q14390 218 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 REEP3Q6NUK4 255 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 DHRS4L2Q6PKH6 230 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 BLOC1S3Q6QNY0 202 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 VHLLQ6RSH7 139 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 COMTD1Q86VU5 262 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 C10orf111Q8N326 155 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 GPR137CQ8N3F9 429 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 NFKBIDQ8NI38 313 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 ZNF417Q8TAU3 575 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 DNAJA4Q8WW22 397 aaPredicted RBP16.02■□□□□ 0.16
CLN6-220ENST00000637450 ZNF837Q96EG3 531 aaPredicted RBP16.02■□□□□ 0.16
CLN6-220ENST00000637450 ZNF587Q96SQ5 575 aaPredicted RBP16.02■□□□□ 0.16
CLN6-220ENST00000637450 PRR14Q9BWN1 585 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 CRLF2Q9HC73 371 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 SLC52A3Q9NQ40 469 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 GMEB1Q9Y692 573 aa16.02■□□□□ 0.16
CLN6-220ENST00000637450 TRAV36DV7A0A075B6V5 113 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 MS4A18H0YCH9 400 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 TPST1O60507 370 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 TGDSO95455 350 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 CELA3BP08861 270 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 ARR3P36575 388 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 PPOXP50336 477 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 IDH3GP51553 393 aaPredicted RBP16.01■□□□□ 0.15
CLN6-220ENST00000637450 STX1BP61266 288 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 CARTPTQ16568 116 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 CEACAM16Q2WEN9 425 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 MS4A18Q3C1V0 323 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 GCNT6Q5T4J0 391 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 ULK3Q6PHR2 472 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 MYPOPQ86VE0 399 aaPredicted RBP16.01■□□□□ 0.15
CLN6-220ENST00000637450 TMEM123Q8N131 208 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 ARIH2OSQ8N7S6 290 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 ADPRHL1Q8NDY3 354 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 PIK3C3Q8NEB9 887 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 MSI2Q96DH6 328 aaKnown RBP16.01■□□□□ 0.15
CLN6-220ENST00000637450 C7orf26Q96N11 449 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 OR2M2Q96R28 347 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 SPATA5L1Q9BVQ7 753 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 ZNF442Q9H7R0 627 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 TCF7L2Q9NQB0 619 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 KLHL14Q9P2G3 628 aa16.01■□□□□ 0.15
CLN6-220ENST00000637450 FBXO9Q9UK97 447 aaPredicted RBP16.01■□□□□ 0.15
CLN6-220ENST00000637450 IGHV4-61A0A0C4DH41 118 aa16■□□□□ 0.15
CLN6-220ENST00000637450 LOC100289279A0A1B0GTE1 492 aa16■□□□□ 0.15
CLN6-220ENST00000637450 ZNF503-AS2A6NEH8 195 aa16■□□□□ 0.15
CLN6-220ENST00000637450 VSTM5A8MXK1 200 aa16■□□□□ 0.15
CLN6-220ENST00000637450 TRAF3IP2O43734 574 aaPredicted RBP16■□□□□ 0.15
CLN6-220ENST00000637450 APEHP13798 732 aaKnown RBP16■□□□□ 0.15
CLN6-220ENST00000637450 THBS2P35442 1172 aa16■□□□□ 0.15
CLN6-220ENST00000637450 THBS4P35443 961 aa16■□□□□ 0.15
CLN6-220ENST00000637450 CDK6Q00534 326 aa16■□□□□ 0.15
CLN6-220ENST00000637450 GLIPR1L2Q4G1C9 344 aa16■□□□□ 0.15
CLN6-220ENST00000637450 ALG10BQ5I7T1 473 aa16■□□□□ 0.15
CLN6-220ENST00000637450 PAGE3Q5JUK9 113 aa16■□□□□ 0.15
CLN6-220ENST00000637450 FAM91A1Q658Y4 838 aa16■□□□□ 0.15
CLN6-220ENST00000637450 FAM166AQ6J272 317 aa16■□□□□ 0.15
CLN6-220ENST00000637450 KRT73Q86Y46 540 aa16■□□□□ 0.15
CLN6-220ENST00000637450 CCDC36Q8IYA8 594 aa16■□□□□ 0.15
CLN6-220ENST00000637450 ZNF540Q8NDQ6 660 aa16■□□□□ 0.15
CLN6-220ENST00000637450 OR6S1Q8NH40 331 aa16■□□□□ 0.15
CLN6-220ENST00000637450 SPDL1Q96EA4 605 aa16■□□□□ 0.15
CLN6-220ENST00000637450 SLC47A1Q96FL8 570 aa16■□□□□ 0.15
CLN6-220ENST00000637450 SLC41A3Q96GZ6 507 aa16■□□□□ 0.15
CLN6-220ENST00000637450 DOK1Q99704 481 aa16■□□□□ 0.15
CLN6-220ENST00000637450 RAB1BQ9H0U4 201 aa16■□□□□ 0.15
CLN6-220ENST00000637450 VAPAQ9P0L0 249 aa16■□□□□ 0.15
CLN6-220ENST00000637450 A0A087WUJ7 227 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 TRBV5-3A0A0A0MS03 114 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 IGHV2OR16-5A0A0B4J2B6 119 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 TMEM129A0AVI4 362 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 SLC35F4A4IF30 521 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 ZNF99A8MXY4 864 aaPredicted RBP15.99■□□□□ 0.15
CLN6-220ENST00000637450 POLR3GO15318 223 aaPredicted RBP15.99■□□□□ 0.15
CLN6-220ENST00000637450 AKAP8O43823 692 aaKnown RBP15.99■□□□□ 0.15
CLN6-220ENST00000637450 NPR2P20594 1047 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 CBLP22681 906 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 PPIBP23284 216 aaKnown RBP15.99■□□□□ 0.15
CLN6-220ENST00000637450 IGFBP5P24593 272 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 IDH3AP50213 366 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 MFSD13AQ14CX5 517 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 IQCCQ4KMZ1 466 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 PHYHD1Q5SRE7 291 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 BEND6Q5SZJ8 279 aaPredicted RBP15.99■□□□□ 0.15
CLN6-220ENST00000637450 NHLRC1Q6VVB1 395 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 MDP1Q86V88 176 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 IL17RDQ8NFM7 739 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 ANKRD27Q96NW4 1050 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 EBF4Q9BQW3 602 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms