RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 MEIOBQ8N635 442 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 LSM14AQ8ND56 463 aaKnown RBP12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 OR4D10Q8NGI6 311 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 LRRC20Q8TCA0 184 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 ZMAT3Q9HA38 289 aaKnown RBP12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 NOX3Q9HBY0 568 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 PNO1Q9NRX1 252 aaKnown RBP12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 OR5V1Q9UGF6 321 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 SPEF1Q9Y4P9 236 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 PCDHGA5Q9Y5G8 931 aa12.81□□□□□ -0.36
CACNA1A-228ENST00000636610 TRAV8-7A0A075B6U6 113 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 A0A087WV62 115 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 A6NCN8 305 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 OGG1O15527 345 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 PEX14O75381 377 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 GALP22466 123 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 LCN1P31025 176 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 CD276Q5ZPR3 534 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 MAMSTRQ6ZN01 415 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 GLB1L2Q8IW92 636 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 CTHRC1Q96CG8 243 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 ELMOD3Q96FG2 381 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 GPR137Q96N19 417 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 OR1F2PQ96R84 312 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 ZNF436Q9C0F3 470 aaPredicted RBP12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 OR8D2Q9GZM6 311 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 LYRM4Q9HD34 91 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 Q9N2J8 555 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 EMC7Q9NPA0 242 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 RXFP3Q9NSD7 469 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 TAS2R10Q9NYW0 307 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 ELF5Q9UKW6 265 aaPredicted RBP12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 C5orf67F2Z3F1 127 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 CT45A8P0DMV1 189 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 CT45A9P0DMV2 189 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 ADRA2CP18825 462 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 PSMB1P20618 241 aaKnown RBP12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 ACTA2P62736 377 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 ACTG2P63267 376 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 GAS6Q14393 721 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 ANGPT1Q15389 498 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 CT45A2Q5DJT8 189 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 TCTE1Q5JU00 501 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 OR5M10Q6IEU7 315 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 BCORP1Q8N888 145 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 OR56B4Q8NH76 319 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 NXPE2Q96DL1 559 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 MAP3K3Q99759 626 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 GINS4Q9BRT9 223 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 SYT4Q9H2B2 425 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 ABRACLQ9P1F3 81 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 TMEM184BQ9Y519 407 aaPredicted RBP12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 V9GY05 133 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 EML5Q05BV3 1969 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 A0A0J9YY10 115 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 CHURC1-FNTBB4DL54 471 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 SLC35E2P0CK97 266 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 ITPKBP27987 946 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 LGALS3BPQ08380 585 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 TRAM1Q15629 374 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 CDONQ4KMG0 1287 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 UBE2NLQ5JXB2 153 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 PXDC1Q5TGL8 231 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 MED25Q71SY5 747 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 ZNF676Q8N7Q3 588 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 HAVCR2Q8TDQ0 301 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 C3orf49Q96BT1 292 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 RBP7Q96R05 134 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 AMELYQ99218 206 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 ZNF281Q9Y2X9 895 aa12.8□□□□□ -0.36
CACNA1A-228ENST00000636610 M0R233 179 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 TNFSF14O43557 240 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 KRT33AO76009 404 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 KDM4BO94953 1096 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 PDGFAP04085 211 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 CTHP32929 405 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 EFNB2P52799 333 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 MELKQ14680 651 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 ZMYND11Q15326 602 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 MCATQ8IVS2 390 aaKnown RBP12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 KDM8Q8N371 416 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 OR51D1Q8NGF3 324 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 OR14A16Q8NHC5 309 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 ZNF563Q8TA94 476 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 FCAMRQ8WWV6 532 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 KTI12Q96EK9 354 aaPredicted RBP12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 SCARF2Q96GP6 870 aaPredicted RBP12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 VSTM2LQ96N03 204 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 DGAT2Q96PD7 388 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 ADOQ96SZ5 270 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 PRTFDC1Q9NRG1 225 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 C14orf105Q9NVL8 296 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 FRRS1LQ9P0K9 344 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 CYP8B1Q9UNU6 501 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 RWDD3Q9Y3V2 267 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 TRAV1-2A0A0B4J238 106 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 ANXA2P2A6NMY6 339 aa12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 NUPL2O15504 423 aaKnown RBP12.79□□□□□ -0.36
CACNA1A-228ENST00000636610 TPOP07202 933 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 381 ms