RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 OR5M11Q96RB7 305 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 TXNL4BQ9NX01 149 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 JRKO75564 520 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 GIFP27352 417 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 ASCL1P50553 236 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 SORDQ00796 357 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 BAGE3Q86Y29 109 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 BAGE2Q86Y30 109 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 CD300AQ9UGN4 299 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 RPS10-NUDT3A0A1W2PQS6 291 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 RPS10P46783 165 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 MOB3BQ86TA1 216 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 PTRH1Q86Y79 214 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 ETFBKMTQ8IXQ9 262 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 SLC41A2Q96JW4 573 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 SLC2A13Q96QE2 648 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 HAPLN2Q9GZV7 340 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 ADAM19Q9H013 955 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 TMEM72A0PK05 275 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 ABCD4O14678 606 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 SRPX2O60687 465 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 GNG10P50151 68 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 MSMO1Q15800 293 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 BTLAQ7Z6A9 289 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 WDTC1Q8N5D0 677 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 MUL1Q969V5 352 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 ATF6BQ99941 703 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 KATNB1Q9BVA0 655 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 EPHX3Q9H6B9 360 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 UBQLN4Q9NRR5 601 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 NDRG3Q9UGV2 375 aa16.54■□□□□ 0.24
CACNA1A-227ENST00000636549 C17orf112F2Z3M2 114 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 HTR3AP46098 478 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 SEMA3BQ13214 749 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 KIR2DS3Q14952 304 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 PDZD11Q5EBL8 140 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 SIGLEC10Q96LC7 697 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 ADGRB2O60241 1585 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 KIR2DS5A0A0G2JLQ3 304 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 A0A0G2JNG1 304 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 KIR2DS3K7RE56 304 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 PROZP22891 400 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 HTR1EP28566 365 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 NOVA1P51513 510 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 KIR2DS5Q14953 304 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 GLYR1Q49A26 553 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 COQ5Q5HYK3 327 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 SNAPC3Q92966 411 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 CCDC32Q9BV29 185 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 LHPPQ9H008 270 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 COQ4Q9Y3A0 265 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 R4GN57 208 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 MED1Q15648 1581 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 M0QYG6 137 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 PTGESO14684 152 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 PRR27Q6MZM9 219 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 SSX7Q7RTT5 188 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 BCDIN3DQ7Z5W3 292 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 UBTD1Q9HAC8 227 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 POPDC3Q9HBV1 291 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 LHX6Q9UPM6 363 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 DPM1O60762 260 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 HCCSP53701 268 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 RAC1P63000 192 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 PRTGQ2VWP7 1150 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 KIAA1958Q8N8K9 716 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 OR1J2Q8NGS2 313 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 PATE1Q8WXA2 126 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 SLC5A10A0PJK1 596 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 CDK2AP1O14519 115 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 PAGE3Q5JUK9 113 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 GLCCI1Q86VQ1 547 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 GDE1Q9NZC3 331 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 POMT1Q9Y6A1 747 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 URGCP-MRPS24S4R325 110 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 A0A1W2PNR3 127 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 ATXN7O15265 892 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 GPR37O15354 613 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 HOXA11P31270 313 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 CLDN8P56748 225 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 HNRNPA1L2Q32P51 320 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 ARL11Q969Q4 196 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 EGLN1Q9GZT9 426 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 RASD1Q9Y272 281 aa16.53■□□□□ 0.24
CACNA1A-227ENST00000636549 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 DEFB124Q8NES8 71 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 B3GNT7Q8NFL0 401 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 RSRP1Q9BUV0 290 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 KCND3Q9UK17 655 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 MYH2Q9UKX2 1941 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 TMED7-TICAM2A0A0A6YYA0 188 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 TSTD3H0UI37 97 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 CLEC12BQ2HXU8 276 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 NPEPL1Q8NDH3 523 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 RHBDF1Q96CC6 855 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 IER2Q9BTL4 223 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 MRPS28Q9Y2Q9 187 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 TMED7Q9Y3B3 224 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 LTN1O94822 1766 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 ZNF264O43296 627 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms