RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ANXA2P07355 339 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 IFI6P09912 130 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 ZNF10P21506 573 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 ZNF234Q14588 700 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 TCEAL5Q5H9L2 206 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 ZNF684Q5T5D7 378 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 DCAF12L2Q5VW00 463 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 ULK3Q6PHR2 472 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 TMPRSS12Q86WS5 348 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 OR5AK2Q8NH90 309 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 EDAQ92838 391 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 ATOH1Q92858 354 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 NKX6-2Q9C056 277 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 IL21RQ9HBE5 538 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 DAPP1Q9UN19 280 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 KCNK7Q9Y2U2 307 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 OR1A2Q9Y585 309 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 OR52A4PA6NMU1 304 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 MCIDASD6RGH6 385 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 PMS2P2O95744 297 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 IGF2P01344 180 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 NGFRP08138 427 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 MELTFP08582 738 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 STARP49675 285 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 ALKBH1Q13686 389 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 C4orf46Q504U0 113 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 CCDC157Q569K6 752 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 STPG1Q5TH74 334 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 ANKRD16Q6P6B7 361 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 LINC00114Q6XXX2 140 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 RTL10Q7L3V2 364 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 LRRTM1Q86UE6 522 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 ETFBKMTQ8IXQ9 262 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 NMNAT3Q96T66 252 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 RXFP3Q9NSD7 469 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 DEC1Q9P2X7 70 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 STEAP1Q9UHE8 339 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 CDV3Q9UKY7 258 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 SLC22A7Q9Y694 548 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 TRBV5-5A0A0J9YX44 114 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 GGT3PA6NGU5 568 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 PCP4L1A6NKN8 68 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 GTF2F2P13984 249 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 ADRA2CP18825 462 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 CSF2RBP32927 897 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 GABRA3P34903 492 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 GPR143P51810 404 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 MC2RQ01718 297 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 PLAURQ03405 335 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 CLVS2Q5SYC1 327 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 MOB3CQ70IA8 216 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 ZNF546Q86UE3 836 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 LSRQ86X29 649 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 ZNF417Q8TAU3 575 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 SUSD6Q92537 303 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 PTCHD1Q96NR3 888 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 SLC6A17Q9H1V8 727 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 TSPAN10Q9H1Z9 355 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 EXO5Q9H790 373 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 KIR3DX1Q9H7L2 352 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 NDRG3Q9UGV2 375 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 HEBP2Q9Y5Z4 205 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 NUMA1Q14980 2115 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 DENND4AQ7Z401 1863 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 IDSB3KWA1 339 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 LATO43561 262 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 SMIM10L1P0DMW3 83 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 MAP3K8P41279 467 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 ACAA2P42765 397 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 PSMD4P55036 377 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 DEFB103AP81534 67 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 RUNX2Q13950 521 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 UQCC3Q6UW78 93 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 OR51S1Q8NGJ8 323 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 PHYHIPLQ96FC7 376 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 SMIM10Q96HG1 83 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 SEMA4CQ9C0C4 833 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 C1orf198Q9H425 327 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 COLEC10Q9Y6Z7 277 aa13.53□□□□□ -0.24
CACNA1A-220ENST00000635988 OR6C68A6NDL8 312 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 LRRC72A6NJI9 287 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 H7C2Y5 167 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 TMIGD3P0DMS9 266 aaPredicted RBP13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 CNR1P21554 472 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 MAGEB1P43366 347 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 MESP2Q0VG99 397 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 ZNF345Q14585 488 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 STK11Q15831 433 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 DEFB134Q4QY38 66 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 SLC16A9Q7RTY1 509 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 ZNF550Q7Z398 422 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 ZNF614Q8N883 585 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 ZNRF4Q8WWF5 429 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 THRSPQ92748 146 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 MBNL1Q9NR56 388 aaKnown RBP13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 MRTO4Q9UKD2 239 aaKnown RBP13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 ADAM18Q9Y3Q7 739 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 SPACA6W5XKT8 324 aa13.52□□□□□ -0.24
CACNA1A-220ENST00000635988 TMEM272A0A1B0GTI8 110 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms