RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 EEF1E1O43324 174 aaKnown RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 RNF13O43567 381 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 TMIGD3P0DMS9 266 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 CEACAM8P31997 349 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 RPS3AP61247 264 aaKnown RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 ATP6AP1Q15904 470 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 SLC35F1Q5T1Q4 408 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 ZNF474Q6S9Z5 364 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 SMARCD3Q6STE5 483 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 CREB3L2Q70SY1 520 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 ATCAYQ86WG3 371 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 OR9K2Q8NGE7 335 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 RASD2Q96D21 266 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 DUS3LQ96G46 650 aaKnown RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 ZNF347Q96SE7 839 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 TAPBPLQ9BX59 468 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 C12orf10Q9HB07 376 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 CHST11Q9NPF2 352 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 MCTS1Q9ULC4 181 aaKnown RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 TRAPPC4Q9Y296 219 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 ROS1P08922 2347 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 POLQO75417 2590 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 CD8B2A6NJW9 211 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 EFCAB9A8MZ26 197 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 TRAF3IP2O43734 574 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 UPK3AO75631 287 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 RCBTB2O95199 551 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 UQCRC1P31930 480 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 CTBP2P56545 445 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 CLDN17P56750 224 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 FMODQ06828 376 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 FAM27E3Q08E93 113 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 H1FNTQ75WM6 255 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 MRGPRGQ86SM5 289 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 OR5J2Q8NH18 312 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 NRG4Q8WWG1 115 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 SAMD8Q96LT4 415 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 TSSK2Q96PF2 358 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 FN3KQ9H479 309 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 DNAJB9Q9UBS3 223 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 SPIN1Q9Y657 262 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 AKAP9Q99996 3911 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 FLNBO75369 2602 aaKnown RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 ABCA12Q86UK0 2595 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 GJE1A6NN92 205 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 PTP4A3O75365 173 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 CCNB2O95067 398 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 SYNGR4O95473 234 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 CLDN1O95832 211 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 CGAP01215 116 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 IL2RAP01589 272 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 GABRA1P14867 456 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 GCKP35557 465 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 RBM34P42696 430 aaKnown RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 RPS4XP62701 263 aaKnown RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 CSNK2A1P68400 391 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 SLC35A1P78382 337 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 PUDPQ08623 228 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 ETFDHQ16134 617 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 C4orf17Q53FE4 359 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 C1orf94Q6P1W5 598 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 RRM2BQ7LG56 351 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 STK32CQ86UX6 486 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 LRRC75AQ8NAA5 344 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 ZNRF4Q8WWF5 429 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 RND1Q92730 232 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 WNT2BQ93097 391 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 REV1Q9UBZ9 1251 aa7.55□□□□□ -1.2
CDKL5-209ENST00000635828 TMEFF2Q9UIK5 374 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-209ENST00000635828 AKAP6Q13023 2319 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 SLC35F4A4IF30 521 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 LINC01387J3KSC0 135 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 AGFG2O95081 481 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 THRBP10828 461 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 FASP25445 335 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 PEX2P28328 305 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 ZIK1Q3SY52 487 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-209ENST00000635828 SLC36A3Q495N2 470 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 TSPO2Q5TGU0 170 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 BCDIN3DQ7Z5W3 292 aaKnown RBP7.54□□□□□ -1.2
CDKL5-209ENST00000635828 UBE2FQ969M7 185 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 TSPAN32Q96QS1 320 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 KATNB1Q9BVA0 655 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 EI24O14681 340 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 RRP9O43818 475 aaKnown RBP7.54□□□□□ -1.2
CDKL5-209ENST00000635828 PPP1R3DO95685 299 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 GTF2E2P29084 291 aaKnown RBP7.54□□□□□ -1.2
CDKL5-209ENST00000635828 DNAJA1P31689 397 aaKnown RBP7.54□□□□□ -1.2
CDKL5-209ENST00000635828 BIDP55957 195 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 ALKBH2Q6NS38 261 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 NIPAL3Q6P499 406 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 LYPD4Q6UWN0 246 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 TMPRSS11FQ6ZWK6 438 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 FAM214BQ7L5A3 538 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 NANOGNBQ7Z5D8 188 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 OR4Q3Q8NH05 313 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 Q96M85 177 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 EPYCQ99645 322 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 OR52D1Q9H346 318 aa7.54□□□□□ -1.2
CDKL5-209ENST00000635828 FKRPQ9H9S5 495 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms