RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 OXA1LQ15070 435 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 Q5W150 140 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 ZNF880Q6PDB4 577 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 CES3Q6UWW8 571 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 Q6ZR03 302 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 SHISA6Q6ZSJ9 500 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 ZNF546Q86UE3 836 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 LRP11Q86VZ4 500 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 OR2L13Q8N349 312 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 SYNPRQ8TBG9 265 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 RGP1Q92546 391 aaPredicted RBP1.7□□□□□ -2.14
SRP54-214ENST00000630962 PHF3Q92576 2039 aaKnown RBP1.7□□□□□ -2.14
SRP54-214ENST00000630962 OR10C1Q96KK4 312 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 OR2A5Q96R48 311 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 SIRT7Q9NRC8 400 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 POLE3Q9NRF9 147 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 IL36GQ9NZH8 169 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 PCSK1NQ9UHG2 260 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 DHX57Q6P158 1386 aaKnown RBP1.7□□□□□ -2.14
SRP54-214ENST00000630962 PNPLA6Q8IY17 1366 aa1.7□□□□□ -2.14
SRP54-214ENST00000630962 IGHV5-51A0A0C4DH38 117 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 PLAC8L1A1L4L8 177 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 COLCA2A8K830 154 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 POLR2DO15514 142 aaKnown RBP1.69□□□□□ -2.14
SRP54-214ENST00000630962 SCGNO76038 276 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 ALDOBP05062 364 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 IGHV3-43DP0DP04 118 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 PNMTP11086 282 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 CELP19835 753 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 RPS14P62263 151 aaKnown RBP1.69□□□□□ -2.14
SRP54-214ENST00000630962 VGLL4Q14135 290 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 PRPSAP1Q14558 356 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 STK11Q15831 433 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 SLC15A2Q16348 729 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 ZBED5Q49AG3 693 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 KRTAP13-2Q52LG2 175 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 PGAP1Q75T13 922 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 ZNF573Q86YE8 665 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 CATSPER1Q8NEC5 780 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 OR1F12Q8NHA8 337 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 FGF14Q92915 247 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 RMI2Q96E14 147 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 AMDHD1Q96NU7 426 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 TSSK3Q96PN8 268 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 EDEM2Q9BV94 578 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 ZFP14Q9HCL3 533 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 SLC40A1Q9NP59 571 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 GIN1Q9NXP7 522 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 ZNRD1Q9P1U0 126 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 ACTR3BQ9P1U1 418 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 XCL2Q9UBD3 114 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 ODF2LQ9ULJ1 636 aa1.69□□□□□ -2.14
SRP54-214ENST00000630962 NFASCO94856 1347 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 TRIOBPQ9H2D6 2365 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 A0A0G2JLM5 398 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 ZNF705GA8MUZ8 300 aaPredicted RBP1.68□□□□□ -2.14
SRP54-214ENST00000630962 INS-IGF2F8WCM5 200 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 RRP8O43159 456 aaKnown RBP1.68□□□□□ -2.14
SRP54-214ENST00000630962 CD5LO43866 347 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 B4GALT2O60909 372 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 SLC25A14O95258 325 aaPredicted RBP1.68□□□□□ -2.14
SRP54-214ENST00000630962 AK1P00568 194 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 CHI3L1P36222 383 aaPredicted RBP1.68□□□□□ -2.14
SRP54-214ENST00000630962 RPL13AP40429 203 aaKnown RBP1.68□□□□□ -2.14
SRP54-214ENST00000630962 SSR1P43307 286 aaKnown RBP1.68□□□□□ -2.14
SRP54-214ENST00000630962 NAMPTP43490 491 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 CRYBB1P53674 252 aaPredicted RBP1.68□□□□□ -2.14
SRP54-214ENST00000630962 SPIBQ01892 262 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 KLHL30Q0D2K2 578 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 GUCA2BQ16661 112 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 RSPO1Q2MKA7 263 aaPredicted RBP1.68□□□□□ -2.14
SRP54-214ENST00000630962 TTLL9Q3SXZ7 439 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 GGTA1PQ4G0N0 100 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 HSP90AA5PQ58FG0 334 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 C1orf220Q5T0J3 134 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 NCR3LG1Q68D85 454 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 TMEM225Q6GV28 225 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 FAM92BQ6ZTR7 304 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 CCDC80Q76M96 950 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 GET4Q7L5D6 327 aaPredicted RBP1.68□□□□□ -2.14
SRP54-214ENST00000630962 ARL10Q8N8L6 244 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 OR5W2Q8NH69 310 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 ZNF461Q8TAF7 563 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 UFD1Q92890 307 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 DNAJC19Q96DA6 116 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 C4orf36Q96KX1 117 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 CLCC1Q96S66 551 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 ULBP2Q9BZM5 246 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 PARP12Q9H0J9 701 aaKnown RBP1.68□□□□□ -2.14
SRP54-214ENST00000630962 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.68□□□□□ -2.14
SRP54-214ENST00000630962 THUMPD1Q9NXG2 353 aaKnown RBP1.68□□□□□ -2.14
SRP54-214ENST00000630962 CALYQ9NYX4 217 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 RFNGQ9Y644 331 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
SRP54-214ENST00000630962 IGSF9BQ9UPX0 1349 aa1.67□□□□□ -2.14
SRP54-214ENST00000630962 DOCK9Q9BZ29 2069 aa1.67□□□□□ -2.14
SRP54-214ENST00000630962 IGLV3-12A0A075B6K2 115 aa1.67□□□□□ -2.14
SRP54-214ENST00000630962 LRP5LA4QPB2 252 aa1.67□□□□□ -2.14
SRP54-214ENST00000630962 RBMY1BA6NDE4 496 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms