RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 FAM220AQ7Z4H9 259 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 DTX1Q86Y01 620 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 GRAMD2AQ8IUY3 354 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 POGLUT1Q8NBL1 392 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 OR6N1Q8NGY5 312 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 TMEM163Q8TC26 289 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 ELP5Q8TE02 316 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 ZNF775Q96BV0 537 aaPredicted RBP11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 PLA2G12AQ9BZM1 189 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 MCCC2Q9HCC0 563 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 MCTS1Q9ULC4 181 aaKnown RBP11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 TMED7Q9Y3B3 224 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 DIDO1Q9BTC0 2240 aaKnown RBP11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 CACNA1CQ13936 2221 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 LOC102723996A0A087X1L8 192 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 HTR3EA5X5Y0 456 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 SLC22A31A6NKX4 558 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 TAF4O00268 1085 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 SUSD5O60279 629 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 CRYABP02511 175 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 CASP3P42574 277 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 ST3GAL2Q16842 350 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 STEAP3Q658P3 488 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 TIGD3Q6B0B8 471 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 ACSM5Q6NUN0 579 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 PAQR6Q6TCH4 344 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 MBOAT2Q6ZWT7 520 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 CXXC5Q7LFL8 322 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 FAM83FQ8NEG4 500 aaPredicted RBP11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 SLC6A5Q9Y345 797 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 N6AMT1Q9Y5N5 214 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 KRT8P05787 483 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 TLE3Q04726 772 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 PRKCDQ05655 676 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 PAMR1Q6UXH9 720 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 CCDC190Q86UF4 302 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 PARP16Q8N5Y8 322 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 POMGNT2Q8NAT1 580 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 NAA11Q9BSU3 229 aaPredicted RBP11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 HES7Q9BYE0 225 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 SPEGQ15772 3267 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 FPR3P25089 353 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 RPS5P46782 204 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 POLR2HP52434 150 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 ZNF91Q05481 1191 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 CBLN3Q6UW01 205 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 SLC43A2Q8N370 569 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 FAM26EQ8N5C1 309 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 NANOGP1Q8N7R0 232 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 OR10H4Q8NGA5 316 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 COQ7Q99807 217 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 LAT2Q9GZY6 243 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 TPK1Q9H3S4 243 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 STUB1Q9UNE7 303 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 PCNX1Q96RV3 2341 aa11.3□□□□□ -0.6
SYNGAP1-207ENST00000628646 ALG1L2C9J202 215 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 TMCC2O75069 709 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 SP1P08047 785 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 LCN1P31025 176 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 PMP22Q01453 160 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 ARHGAP11AQ6P4F7 1023 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 IQCF1Q8N6M8 205 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 ZNF485Q8NCK3 441 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 SEMA4CQ9C0C4 833 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 NTMQ9P121 344 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 IL20RAQ9UHF4 553 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 KCNMB2Q9Y691 235 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 OR2T1O43869 369 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 SERPINA3P01011 423 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 S1PR1P21453 382 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 CNR1P21554 472 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 POU4F2Q12837 409 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 DDI2Q5TDH0 399 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 GFRALQ6UXV0 394 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 MAMDC2Q7Z304 686 aaPredicted RBP11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 ACBD7Q8N6N7 88 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 CNEP1R1Q8N9A8 125 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 OR8D4Q8NGM9 314 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 ADIPOR1Q96A54 375 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 ARHGDIGQ99819 225 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 TRIM36Q9NQ86 728 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 SNTG1Q9NSN8 517 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 FLRT3Q9NZU0 649 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 GTF2A1LQ9UNN4 478 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 ISPDA4D126 451 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 H3BMH7 237 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 SPNP16150 400 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 ACTC1P68032 377 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 ACTA1P68133 377 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 ZNF117Q03924 483 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 ZNF169Q14929 603 aaPredicted RBP11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 PON3Q15166 354 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 TRAM1Q15629 374 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 SYT14P1Q58G82 188 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 EXOSC6Q5RKV6 272 aaKnown RBP11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 ZNF613Q6PF04 617 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 GRINAQ7Z429 371 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 GPALPP1Q8IXQ4 340 aa11.29□□□□□ -0.6
SYNGAP1-207ENST00000628646 NFAM1Q8NET5 270 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms