RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 RCE1Q9Y256 329 aa11.73□□□□□ -0.53
SOX2-OT-241ENST00000626948 A0A0B4J2E0 115 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 IGHV4-61A0A0C4DH41 118 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 LOC102725191A0A1B0GVB3 256 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 A0A1B0GX12 115 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 KRT33AO76009 404 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 LYPD3O95274 346 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 OR4A8P0C604 315 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 SERPINF1P36955 418 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 CDK6Q00534 326 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 NPTX1Q15818 432 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 CEACAM16Q2WEN9 425 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 GCNT6Q5T4J0 391 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 AGBL2Q5U5Z8 902 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 RETREG3Q86VR2 466 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 GOLGA6L1Q8N7Z2 621 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 GPR32P1Q8NGA4 272 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 OR4D11Q8NGI4 311 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 PROX1Q92786 737 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 FOXN4Q96NZ1 517 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 CPPED1Q9BRF8 314 aaPredicted RBP11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 EMC6Q9BV81 110 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 PLK3Q9H4B4 646 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 ZNF385DQ9H6B1 395 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 CRLF2Q9HC73 371 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 B3GNT2Q9NY97 397 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 ZNF224Q9NZL3 707 aa11.72□□□□□ -0.53
SOX2-OT-241ENST00000626948 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.71□□□□□ -0.536e-29■■■■■ 48.3
SOX2-OT-241ENST00000626948 TRAV36DV7A0A075B6V5 113 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 A0A087WUJ7 227 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 IGHV2OR16-5A0A0B4J2B6 119 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 POLR3GO15318 223 aaPredicted RBP11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 MFN2O95140 757 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 TGDSO95455 350 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 CBR1P16152 277 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 ZNF43P17038 809 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 USF1P22415 310 aaPredicted RBP11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 IGFBP5P24593 272 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 AQP1P29972 269 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 THBS4P35443 961 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 NR4A2P43354 598 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 AQP5P55064 265 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 CDH12P55289 794 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 PCBP3P57721 371 aaKnown RBP11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 SRSF2Q01130 221 aaKnown RBP11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 CHRNB3Q05901 458 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 OR1Q1Q15612 314 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 EFNB3Q15768 340 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 C3orf36Q3SXR2 165 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 CHRFAM7AQ494W8 412 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 ALG10BQ5I7T1 473 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 REEP3Q6NUK4 255 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 VHLLQ6RSH7 139 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 KLHL24Q6TFL4 600 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 WDR88Q6ZMY6 472 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 H1FNTQ75WM6 255 aaPredicted RBP11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 ABHD12BQ7Z5M8 362 aaPredicted RBP11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 MDP1Q86V88 176 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 FAM169BQ8N8A8 192 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 MSI2Q96DH6 328 aaKnown RBP11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 DOK1Q99704 481 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 CCDC28BQ9BUN5 200 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 TMEM38AQ9H6F2 299 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 MED29Q9NX70 200 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 PMF1-BGLAPU3KQ54 211 aa11.71□□□□□ -0.53
SOX2-OT-241ENST00000626948 TMEM247A6NEH6 219 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 OR6C65A6NJZ3 312 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 AIM2O14862 343 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 SLC43A1O75387 559 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 ERLIN1O75477 346 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 CRYAAP02489 173 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 FAM157CP0CG43 387 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 IDH3GP51553 393 aaPredicted RBP11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 CRYBA2P53672 197 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 UBE2NP61088 152 aaKnown RBP11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 LSM11P83369 360 aaKnown RBP eCLIP11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 SCARB2Q14108 478 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 DUSP7Q16829 419 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 AGKQ53H12 422 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 RUNDC3AQ59EK9 446 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 ULK3Q6PHR2 472 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 LINC00114Q6XXX2 140 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 IL17RELQ6ZVW7 336 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 RBM45Q8IUH3 476 aaKnown RBP11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 C20orf196Q8IYI0 205 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 SMYD1Q8NB12 490 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 ADPRHL1Q8NDY3 354 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 ANKK1Q8NFD2 765 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 NUP37Q8NFH4 326 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 FGFBP3Q8TAT2 258 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 MS4A3Q96HJ5 214 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 ZNF317Q96PQ6 595 aaPredicted RBP11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 RAD21L1Q9H4I0 556 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 ARMC7Q9H6L4 198 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 TMEM160Q9NX00 188 aa11.7□□□□□ -0.54
SOX2-OT-241ENST00000626948 B9A039 149 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 C5orf58C9J3I9 102 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 M0R3G1 203 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 M0R3H8 397 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 OR2T1O43869 369 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms