RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 NXPH1P58417 271 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 CTXN1P60606 82 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 HNRNPKP61978 463 aaKnown RBP eCLIP8.57□□□□□ -1.04
PDPN-212ENST00000621990 HSD11B2P80365 405 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 DGCR2P98153 550 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 RPL18Q07020 188 aaKnown RBP8.57□□□□□ -1.04
PDPN-212ENST00000621990 MAB21L1Q13394 359 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 DYRK1AQ13627 763 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 KLF9Q13886 244 aaPredicted RBP8.57□□□□□ -1.04
PDPN-212ENST00000621990 KCNAB1Q14722 419 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 EBPQ15125 230 aaKnown RBP8.57□□□□□ -1.04
PDPN-212ENST00000621990 MESTQ5EB52 335 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 GPR139Q6DWJ6 353 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 FAM199XQ6PEV8 388 aaPredicted RBP8.57□□□□□ -1.04
PDPN-212ENST00000621990 GHDCQ8N2G8 530 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 BMPERQ8N8U9 685 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 C1orf216Q8TAB5 229 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 LGALS14Q8TCE9 139 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 TSLPQ969D9 159 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 TSPAN32Q96QS1 320 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 KLHDC3Q9BQ90 382 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 MRI1Q9BV20 369 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 RTN4RQ9BZR6 473 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 DPAGT1Q9H3H5 408 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 LMAN1LQ9HAT1 526 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 PLEKHA1Q9HB21 404 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 PNO1Q9NRX1 252 aaKnown RBP8.57□□□□□ -1.04
PDPN-212ENST00000621990 MRM2Q9UI43 246 aaKnown RBP8.57□□□□□ -1.04
PDPN-212ENST00000621990 KLHDC2Q9Y2U9 406 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 AK6Q9Y3D8 172 aaKnown RBP8.57□□□□□ -1.04
PDPN-212ENST00000621990 TRBV5-5A0A0J9YX44 114 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 IDSB3KWA1 339 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 TSPAN2O60636 221 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 CPNE3O75131 537 aaKnown RBP8.57□□□□□ -1.04
PDPN-212ENST00000621990 ICOSLGO75144 302 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 DPP4P27487 766 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 TACR3P29371 465 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 EVI2BP34910 448 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 RPL6Q02878 288 aaKnown RBP8.57□□□□□ -1.04
PDPN-212ENST00000621990 ZNF117Q03924 483 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 DEFB133Q30KQ1 61 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 NKAIN2Q5VXU1 208 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 TTLL10Q6ZVT0 673 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 SIAH3Q8IW03 269 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 TOMM5Q8N4H5 51 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 ZNF511Q8NB15 262 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 GRPEL2Q8TAA5 225 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 TAAR8Q969N4 342 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 NDEL1Q9GZM8 345 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 TEKT2Q9UIF3 430 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 RNF215Q9Y6U7 377 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 TP53BP1Q12888 1972 aaPredicted RBP8.57□□□□□ -1.04
PDPN-212ENST00000621990 ADAMTS20P59510 1910 aa8.57□□□□□ -1.04
PDPN-212ENST00000621990 HSPB2A8KAH6 182 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 ALG1L2C9J202 215 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 AGRPO00253 132 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 DCTN6O00399 190 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 DHFRP00374 187 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 TCRBP04435 133 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 MAOBP27338 520 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 OR1D4P47884 311 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 CCR4P51679 360 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 EGR3Q06889 387 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 CCDC85BQ15834 202 aaPredicted RBP8.56□□□□□ -1.04
PDPN-212ENST00000621990 HSPB2Q16082 182 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 EEF1A1P5Q5VTE0 462 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 SLC22A10Q63ZE4 541 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 KRT74Q7RTS7 529 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 CDH24Q86UP0 819 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 C9orf40Q8IXQ3 194 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 OR2T4Q8NH00 348 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 SLC25A38Q96DW6 304 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 TSSK2Q96PF2 358 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 GFM1Q96RP9 751 aaKnown RBP8.56□□□□□ -1.04
PDPN-212ENST00000621990 ADOQ96SZ5 270 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 OR8D2Q9GZM6 311 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 NUDT15Q9NV35 164 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 GRHPRQ9UBQ7 328 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 ARPC4-TTLL3A0A0A6YYG9 625 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 A0A1B0GVT2 93 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 MBTPS2O43462 519 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 CDC40O60508 579 aaKnown RBP eCLIP8.56□□□□□ -1.04
PDPN-212ENST00000621990 EIF4E2O60573 245 aaKnown RBP8.56□□□□□ -1.04
PDPN-212ENST00000621990 BGLAPP02818 100 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 F13BP05160 661 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 CD3GP09693 182 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 CFPP27918 469 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 SMAD4Q13485 552 aaKnown RBP8.56□□□□□ -1.04
PDPN-212ENST00000621990 TDGQ13569 410 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 BCL2L15Q5TBC7 163 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 LAMTOR1Q6IAA8 161 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 NANOGNBQ7Z5D8 188 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 CMTM4Q8IZR5 234 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 OR6V1Q8N148 313 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 D2HGDHQ8N465 521 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 DEFB119Q8N690 84 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 C10orf53Q8N6V4 93 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 ZNF441Q8N8Z8 693 aa8.56□□□□□ -1.04
PDPN-212ENST00000621990 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.56□□□□□ -1.04
PDPN-212ENST00000621990 OR2M2Q96R28 347 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms